Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10659 and 10660 are separated by 520 nucleotides10660 and 10661 are separated by 161 nucleotides10661 and 10662 are separated by 162 nucleotides10662 and 10663 are separated by 123 nucleotides mRNA_2291: 10659 - HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SUPERFAMILY--SSF53300, at 540,927 to 542,780 10659 mRNA_2292: 10660 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 543,301 to 545,980 10660 mRNA_2293: 10661 - BLAST splicing arginine serine-rich 12 [Moesziomyces an..., at 546,142 to 547,358 10661 mRNA_2294: 10662 - KOG4131 Ngg1-interacting factor 3 protein NIF3L1, at 547,521 to 548,816 10662 mRNA_2295: 10663 - BLAST CsbD-like [Xanthophyllomyces dendrorhous], at 548,940 to 549,587 10663
Group Condition mRNA_2291 mRNA_2292 mRNA_2293 mRNA_2294 mRNA_2295
10659 10660 10661 10662 10663
ypd buoyancy 40 hrs High Buoyancy -0.5 -0.2 -0.3 -0.6 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.3 -0.1 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.1 -0.3 -0.4 +0.2
growth on oleic acid YNB Oleic Acid -0.4 +0.2 -0.3 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1 +0.1 -0.0 +0.1
growth on ypd YPD +0.0 +0.2 +0.1 -0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.0 -0.2 -0.1 -0.2
growth on oleic acid YNB Glucose -0.4 -0.0 +0.5 +0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 +0.2 -0.4 +0.3 +0.3
growth on ricinoleic acid YNB Glucose -0.2 +0.2 +0.2 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.0 +0.3 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 -0.1 -0.2 +0.1 -0.1
auxotrophy YNB Glucose +0.5 +0.2 +0.3 -0.2 -0.2
auxotrophy Dropout Complete +0.7 +0.1 +0.2 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.1 -0.5 +0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.7 -0.0 +0.2 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +1.3 +0.1 -0.7 +0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 +0.2 -0.3 +0.7 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.1 -0.1 -0.2 +0.5 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.1 +0.7 +0.3 +0.5
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.1 +0.7 +0.8 +0.7
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