Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10664 and 10665 are separated by 689 nucleotides10665 and 10666 are separated by 208 nucleotides10666 and 10667 are separated by 569 nucleotides10667 and 10668 are separated by 173 nucleotides mRNA_2296: 10664 - K05289 GAA1 glycosylphosphatidylinositol transamidase, at 549,665 to 551,990 10664 mRNA_2297: 10665 - HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593, at 552,680 to 555,232 10665 mRNA_2298: 10666 - K15148 MED7 mediator of RNA polymerase II transcription subunit 7, at 555,441 to 556,485 10666 mRNA_2299: 10667 - Hypothetical Protein, at 557,055 to 559,337 10667 mRNA_2300: 10668 - Hypothetical Protein, at 559,511 to 559,996 10668
Group Condition mRNA_2296 mRNA_2297 mRNA_2298 mRNA_2299 mRNA_2300
10664 10665 10666 10667 10668
growth on oleic acid YNB Glucose N.D. -0.3 -0.5 -0.1 -0.1
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.5 +0.0 -0.2
growth on ypd YPD N.D. +0.2 -0.5 +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 -0.2 +0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 -0.2 +0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.2 -0.0 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 -0.1 -0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.3 -0.2 +0.5 -0.1
growth on ricinoleic acid YNB Glucose N.D. -0.2 -0.2 +0.2 +0.2
auxotrophy YNB Glucose N.D. -0.2 -0.2 +0.5 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 -0.3 +0.3 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.2 +0.4 -0.1 +0.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.1 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.5 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 +0.1 +0.4 -0.2
auxotrophy Dropout Complete N.D. -0.2 +0.0 +0.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 -0.1 +0.8 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 +0.1 +0.4 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.1 -0.2 +0.9 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 -0.2 +0.8 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 +0.2 +0.5 +0.1
remove
mRNA_2296
plot
remove
mRNA_2297
plot
remove
mRNA_2298
remove
mRNA_2299
plot
remove
mRNA_2300
plot