Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10665 and 10666 are separated by 208 nucleotides10666 and 10667 are separated by 569 nucleotides10667 and 10668 are separated by 173 nucleotides10668 and 10669 are separated by 290 nucleotides mRNA_2297: 10665 - HMMPfam-Acyltransferase-PF01553,SMART-Phosphate acyltransferases-SM00563,SUPERFAMILY--SSF69593, at 552,680 to 555,232 10665 mRNA_2298: 10666 - K15148 MED7 mediator of RNA polymerase II transcription subunit 7, at 555,441 to 556,485 10666 mRNA_2299: 10667 - Hypothetical Protein, at 557,055 to 559,337 10667 mRNA_2300: 10668 - Hypothetical Protein, at 559,511 to 559,996 10668 mRNA_2301: 10669 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 560,287 to 562,676 10669
Group Condition mRNA_2297 mRNA_2298 mRNA_2299 mRNA_2300 mRNA_2301
10665 10666 10667 10668 10669
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.4 -0.1 +0.0 -1.4
growth on oleic acid YNB Glucose -0.3 -0.5 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.0 -0.1 +0.1 -0.8
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 -0.1 -0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.5 -0.1 -0.2 -0.5
growth on ypd YPD +0.2 -0.5 +0.1 -0.2 +0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.5 +0.0 -0.2 +0.5
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 +0.1 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.2 +0.5 -0.1 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.1 +0.4 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.1 +0.8 -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 +0.3 +0.4 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 -0.0 -0.1 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.4 +0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.2 -0.2 +0.2 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.2 +0.9 -0.3 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.2 +0.3 -0.3 +0.6
auxotrophy YNB Glucose -0.2 -0.2 +0.5 -0.1 +0.4
auxotrophy Dropout Complete -0.2 +0.0 +0.5 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.2 +0.5 +0.1 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 +0.8 +0.2 +0.4
remove
mRNA_2297
plot
remove
mRNA_2298
plot
remove
mRNA_2299
remove
mRNA_2300
plot
remove
mRNA_2301
plot