Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10666 and 10667 are separated by 569 nucleotides10667 and 10668 are separated by 173 nucleotides10668 and 10669 are separated by 290 nucleotides10669 and 10670 are separated by 338 nucleotides mRNA_2298: 10666 - K15148 MED7 mediator of RNA polymerase II transcription subunit 7, at 555,441 to 556,485 10666 mRNA_2299: 10667 - Hypothetical Protein, at 557,055 to 559,337 10667 mRNA_2300: 10668 - Hypothetical Protein, at 559,511 to 559,996 10668 mRNA_2301: 10669 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 560,287 to 562,676 10669 mRNA_2302: 10670 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 563,015 to 564,806 10670
Group Condition mRNA_2298 mRNA_2299 mRNA_2300 mRNA_2301 mRNA_2302
10666 10667 10668 10669 10670
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.1 +0.0 -1.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.1 -0.2 -0.5 -0.9
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 -0.6 -0.0
growth on oleic acid YNB Glucose -0.5 -0.1 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.1 +0.1 -0.8 +0.2
growth on oleic acid YNB Oleic Acid -0.5 +0.0 -0.2 +0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.5 -0.1 +0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +0.4 -0.2 -0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.0 -0.1 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.9 -0.3 -0.3 -0.3
growth on ypd YPD -0.5 +0.1 -0.2 +0.1 +0.4
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 -0.1 +0.2 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 +0.3 -0.3 +0.6 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.3 +0.4 +0.0 -0.4
growth on ricinoleic acid YNB Glucose -0.2 +0.2 +0.2 +0.2 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.5 +0.1 -0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.8 -0.2 -0.3 -0.0
auxotrophy YNB Glucose -0.2 +0.5 -0.1 +0.4 -0.4
auxotrophy Dropout Complete +0.0 +0.5 -0.1 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.4 +0.1 -0.3 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.8 +0.2 +0.4 -0.1
remove
mRNA_2298
plot
remove
mRNA_2299
plot
remove
mRNA_2300
remove
mRNA_2301
plot
remove
mRNA_2302
plot