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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10666 and 10667 are separated by 569 nucleotides
10667 and 10668 are separated by 173 nucleotides
10668 and 10669 are separated by 290 nucleotides
10669 and 10670 are separated by 338 nucleotides
mRNA_2298: 10666 - K15148 MED7 mediator of RNA polymerase II transcription subunit 7, at 555,441 to 556,485
10666
mRNA_2299: 10667 - Hypothetical Protein, at 557,055 to 559,337
10667
mRNA_2300: 10668 - Hypothetical Protein, at 559,511 to 559,996
10668
mRNA_2301: 10669 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 560,287 to 562,676
10669
mRNA_2302: 10670 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 563,015 to 564,806
10670
Group
Condition
mRNA
_2298
mRNA
_2299
mRNA
_2300
mRNA
_2301
mRNA
_2302
10666
10667
10668
10669
10670
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
-0.1
+0.0
-1.4
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.5
-0.1
-0.2
-0.5
-0.9
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.1
-0.6
-0.0
growth on oleic acid
YNB Glucose
-0.5
-0.1
-0.1
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.1
+0.1
-0.8
+0.2
growth on oleic acid
YNB Oleic Acid
-0.5
+0.0
-0.2
+0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.5
-0.1
+0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
+0.4
-0.2
-0.2
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.0
-0.1
+0.0
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
+0.9
-0.3
-0.3
-0.3
growth on ypd
YPD
-0.5
+0.1
-0.2
+0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.1
-0.1
+0.2
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.3
-0.3
+0.6
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.3
+0.4
+0.0
-0.4
growth on ricinoleic acid
YNB Glucose
-0.2
+0.2
+0.2
+0.2
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.5
+0.1
-0.4
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.8
-0.2
-0.3
-0.0
auxotrophy
YNB Glucose
-0.2
+0.5
-0.1
+0.4
-0.4
auxotrophy
Dropout Complete
+0.0
+0.5
-0.1
+0.2
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
+0.4
+0.1
-0.3
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
+0.8
+0.2
+0.4
-0.1
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