Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10667 and 10668 are separated by 173 nucleotides10668 and 10669 are separated by 290 nucleotides10669 and 10670 are separated by 338 nucleotides10670 and 10671 are separated by 905 nucleotides mRNA_2299: 10667 - Hypothetical Protein, at 557,055 to 559,337 10667 mRNA_2300: 10668 - Hypothetical Protein, at 559,511 to 559,996 10668 mRNA_2301: 10669 - HMMPfam-Transmembrane amino acid transporter protein-PF01490, at 560,287 to 562,676 10669 mRNA_2302: 10670 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 563,015 to 564,806 10670 mRNA_2303: 10671 - Hypothetical Protein, at 565,712 to 566,657 10671
Group Condition mRNA_2299 mRNA_2300 mRNA_2301 mRNA_2302 mRNA_2303
10667 10668 10669 10670 10671
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 +0.1 -0.8 +0.2 -2.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.0 -1.4 -0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.2 -0.5 -0.9 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 +0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.2 -0.2 -0.5 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.6 -0.0 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.4 +0.0 -0.4 -0.4
growth on oleic acid YNB Glucose -0.1 -0.1 -0.1 -0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.2 +0.2 +0.2 -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.1 +0.1 -0.5 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.3 +0.6 -0.5 +0.1
growth on oleic acid YNB Oleic Acid +0.0 -0.2 +0.5 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.2 +0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.1 -0.3 +0.2 +0.1
auxotrophy YNB Glucose +0.5 -0.1 +0.4 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.9 -0.3 -0.3 -0.3 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.1 -0.4 -0.3 +0.8
growth on ypd YPD +0.1 -0.2 +0.1 +0.4 +0.4
auxotrophy Dropout Complete +0.5 -0.1 +0.2 -0.2 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 +0.2 +0.4 -0.1 -0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.8 -0.2 -0.3 -0.0 +0.5
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