Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10671 and 10672 are separated by 388 nucleotides10672 and 10673 are separated by 218 nucleotides10673 and 10674 are separated by 381 nucleotides10674 and 10675 are separated by 426 nucleotides mRNA_2303: 10671 - Hypothetical Protein, at 565,712 to 566,657 10671 mRNA_2304: 10672 - Hypothetical Protein, at 567,046 to 568,484 10672 mRNA_2305: 10673 - K01082 cysQ, MET22, BPNT1 3'(2'), 5'-bisphosphate nucleotidase, at 568,703 to 570,355 10673 mRNA_2306: 10674 - HMMPfam-ATP synthase complex subunit h-PF10775, at 570,737 to 571,864 10674 mRNA_2307: 10675 - HMMPfam-Mitochondrial ATPase inhibitor, IATP-PF04568,SUPERFAMILY--SSF64602, at 572,291 to 573,066 10675
Group Condition mRNA_2303 mRNA_2304 mRNA_2305 mRNA_2306 mRNA_2307
10671 10672 10673 10674 10675
ypd buoyancy 40 hrs No Buoyancy Separation -2.0 +0.4 N.D. N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.0 N.D. N.D. -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 -0.1 N.D. N.D. -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 N.D. N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.3 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 N.D. N.D. -0.2
auxotrophy Dropout Complete +0.4 -0.5 N.D. N.D. -0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.4 N.D. N.D. +0.1
growth on oleic acid YNB Glucose +0.2 -0.4 N.D. N.D. +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 N.D. N.D. -0.3
auxotrophy YNB Glucose +0.2 -0.3 N.D. N.D. +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 N.D. N.D. +0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.2 N.D. N.D. +0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.5 N.D. N.D. -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.2 N.D. N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.0 N.D. N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 +0.1 N.D. N.D. -0.1
growth on ypd YPD +0.4 +0.2 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.8 -0.3 N.D. N.D. +0.2
remove
mRNA_2303
plot		 remove
mRNA_2304
plot		 remove
mRNA_2305		 remove
mRNA_2306
plot		 remove
mRNA_2307
plot