Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10685 and 10686 are separated by 353 nucleotides10686 and 10687 are separated by 147 nucleotides10687 and 10688 are separated by 1020 nucleotides10688 and 10689 are separated by 1734 nucleotides mRNA_2317: 10685 - K02264 COX5A cytochrome c oxidase subunit 5a, at 592,707 to 594,114 10685 mRNA_2318: 10686 - HMMPfam-Bromodomain associated-PF07524,HMMPfam-Transcription factor TFIID complex subunit 8 C-term-PF10406, at 594,468 to 595,983 10686 mRNA_2319: 10687 - KOG3872 FOG FHA domain, at 596,131 to 598,966 10687 mRNA_2320: 10688 - HMMPfam-Carboxylesterase family-PF00135,SUPERFAMILY--SSF53474, at 599,987 to 602,471 10688 mRNA_2321: 10689 - K14807 DDX51, DBP6 ATP-dependent RNA helicase DDX51/DBP6, at 604,206 to 606,574 10689
Group Condition mRNA_2317 mRNA_2318 mRNA_2319 mRNA_2320 mRNA_2321
10685 10686 10687 10688 10689
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 N.D. -0.7 -0.8 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.4 N.D. +0.1 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.6 N.D. +0.2 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 N.D. -0.4 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 N.D. -0.2 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. -0.2 -0.3 N.D.
growth on ypd YPD +0.1 N.D. +0.1 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 N.D. +0.9 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 N.D. -0.0 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 N.D. +1.0 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.7 N.D. -0.5 +0.2 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. +0.2 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 N.D. +0.5 -0.4 N.D.
growth on oleic acid YNB Glucose +0.3 N.D. +0.6 -0.1 N.D.
growth on oleic acid YNB Oleic Acid +0.2 N.D. +0.8 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.2 N.D. +1.3 -0.2 N.D.
growth on ricinoleic acid YNB Glucose +0.4 N.D. +0.8 +0.2 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 N.D. +1.1 +0.5 N.D.
auxotrophy Dropout Complete +0.6 N.D. +1.3 -0.2 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +1.7 +0.2 N.D.
auxotrophy YNB Glucose +0.6 N.D. +1.4 +0.2 N.D.
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