Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10687 and 10688 are separated by 1020 nucleotides
10688 and 10689 are separated by 1734 nucleotides
10689 and 10690 are separated by 168 nucleotides
10690 and 10691 are separated by 1255 nucleotides
mRNA_2319: 10687 - KOG3872 FOG FHA domain, at 596,131 to 598,966
10687
mRNA_2320: 10688 - HMMPfam-Carboxylesterase family-PF00135,SUPERFAMILY--SSF53474, at 599,987 to 602,471
10688
mRNA_2321: 10689 - K14807 DDX51, DBP6 ATP-dependent RNA helicase DDX51/DBP6, at 604,206 to 606,574
10689
mRNA_2322: 10690 - Hypothetical Protein, at 606,743 to 609,720
10690
mRNA_2323: 10691 - Hypothetical Protein, at 610,976 to 611,573
10691
Group
Condition
mRNA
_2319
mRNA
_2320
mRNA
_2321
mRNA
_2322
mRNA
_2323
10687
10688
10689
10690
10691
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.1
N.D.
-2.1
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.8
N.D.
-0.1
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.5
+0.2
N.D.
-1.1
-0.4
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.3
N.D.
-0.3
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.5
-0.4
N.D.
-0.8
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
N.D.
-0.4
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.2
N.D.
-0.0
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
-0.2
N.D.
+0.0
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.0
-0.3
N.D.
-0.3
-0.0
ypd buoyancy
40 hrs Low Buoyancy
+0.2
+0.0
N.D.
-0.0
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.3
N.D.
-0.4
+0.4
growth on ypd
YPD
+0.1
-0.3
N.D.
-0.3
+0.9
auxotrophy
Dropout Complete
+1.3
-0.2
N.D.
-0.4
-0.2
growth on oleic acid
YNB Glucose
+0.6
-0.1
N.D.
-0.1
+0.2
growth on ricinoleic acid
YNB Glucose
+0.8
+0.2
N.D.
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+1.3
-0.2
N.D.
-0.4
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+1.7
+0.2
N.D.
-0.3
-0.4
growth on oleic acid
YNB Oleic Acid
+0.8
-0.0
N.D.
+0.3
+0.2
auxotrophy
YNB Glucose
+1.4
+0.2
N.D.
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.9
+0.3
N.D.
+0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.1
+0.5
N.D.
-0.1
+0.0
remove
mRNA_2319
plot
remove
mRNA_2320
plot
remove
mRNA_2321
remove
mRNA_2322
plot
remove
mRNA_2323
plot