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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10690 and 10691 are separated by 1255 nucleotides
10691 and 10692 are separated by 49 nucleotides
10692 and 10693 are separated by 379 nucleotides
10693 and 10694 are separated by 105 nucleotides
mRNA_2322: 10690 - Hypothetical Protein, at 606,743 to 609,720
10690
mRNA_2323: 10691 - Hypothetical Protein, at 610,976 to 611,573
10691
mRNA_2324: 10692 - KOG1483 Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily), at 611,623 to 612,935
10692
mRNA_2325: 10693 - Hypothetical Protein, at 613,315 to 614,433
10693
mRNA_2326: 10694 - K03439 trmB, METTL1 tRNA (guanine-N7-)-methyltransferase, at 614,539 to 615,888
10694
Group
Condition
mRNA
_2322
mRNA
_2323
mRNA
_2324
mRNA
_2325
mRNA
_2326
10690
10691
10692
10693
10694
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.1
-0.7
-0.1
-0.4
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
-0.4
+0.1
+0.2
N.D.
auxotrophy
Dropout Complete
-0.4
-0.2
-0.1
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.1
-0.1
-0.3
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.3
-0.4
-0.1
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
+0.2
-0.2
+0.1
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
-0.7
-0.5
+0.7
N.D.
growth on ricinoleic acid
YNB Glucose
-0.0
-0.2
-0.3
-0.1
N.D.
auxotrophy
YNB Glucose
-0.2
-0.1
-0.3
-0.0
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
+0.1
-0.3
+0.1
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.4
+0.2
+0.0
-0.2
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-0.0
-0.3
-0.2
N.D.
growth on oleic acid
YNB Glucose
-0.1
+0.2
+0.0
-0.4
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.2
-0.1
+0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.0
-0.1
+0.1
N.D.
growth on oleic acid
YNB Oleic Acid
+0.3
+0.2
+0.1
-0.4
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.0
+0.1
+0.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.4
+0.5
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.1
+0.2
+0.3
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.2
+0.1
+0.5
N.D.
growth on ypd
YPD
-0.3
+0.9
+0.9
-0.5
N.D.
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