Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10697 and 10698 are separated by 1094 nucleotides10698 and 10699 are separated by 4275 nucleotides10699 and 10700 are separated by 860 nucleotides10700 and 10701 are separated by 663 nucleotides mRNA_2329: 10697 - K10908 POLRMT, RPO41 DNA-directed RNA polymerase, mitochondrial, at 622,463 to 626,733 10697 mRNA_2330: 10698 - KOG0583 Serine/threonine protein kinase, at 627,828 to 630,238 10698 mRNA_2331: 10699 - HMMPfam-Amidohydrolase family-PF07969,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 634,514 to 637,179 10699 mRNA_2332: 10700 - KOG1134 Uncharacterized conserved protein, at 638,040 to 641,999 10700 mRNA_2333: 10701 - KOG1159 NADP-dependent flavoprotein reductase, at 642,663 to 645,138 10701
Group Condition mRNA_2329 mRNA_2330 mRNA_2331 mRNA_2332 mRNA_2333
10697 10698 10699 10700 10701
facs on lipid accumulation Sorted High BODIPY Gate N.D. -3.6 -0.5 -0.3 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.9 -0.4 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.3 -1.2 -0.0 N.D.
growth on oleic acid YNB Glucose N.D. +0.3 -0.5 -0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.4 -0.3 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.0 -0.6 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.6 -0.2 N.D.
growth on oleic acid YNB Oleic Acid N.D. +0.0 -0.6 +0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.0 -0.4 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.2 -0.0 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.2 +0.1 -0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.9 +0.7 +0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 +0.6 -0.6 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.5 -0.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +0.1 -0.0 N.D.
auxotrophy YNB Glucose N.D. +0.7 +0.2 -0.8 N.D.
growth on ricinoleic acid YNB Glucose N.D. +1.0 -0.3 -0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.1 +0.4 +0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 +0.7 -0.0 N.D.
auxotrophy Dropout Complete N.D. +0.2 +0.7 -0.1 N.D.
growth on ypd YPD N.D. +2.4 -0.3 -0.3 N.D.
remove
mRNA_2329
plot
remove
mRNA_2330
plot
remove
mRNA_2331
remove
mRNA_2332
plot
remove
mRNA_2333
plot