Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10699 and 10700 are separated by 860 nucleotides10700 and 10701 are separated by 663 nucleotides10701 and 10702 are separated by 231 nucleotides10702 and 10703 are separated by 130 nucleotides mRNA_2331: 10699 - HMMPfam-Amidohydrolase family-PF07969,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 634,514 to 637,179 10699 mRNA_2332: 10700 - KOG1134 Uncharacterized conserved protein, at 638,040 to 641,999 10700 mRNA_2333: 10701 - KOG1159 NADP-dependent flavoprotein reductase, at 642,663 to 645,138 10701 mRNA_2334: 10702 - K17815 EXO5 exonuclease V, at 645,370 to 647,887 10702 mRNA_2335: 10703 - K20098 ERCC6L2 DNA excision repair protein ERCC-6-like 2, at 648,018 to 653,331 10703
Group Condition mRNA_2331 mRNA_2332 mRNA_2333 mRNA_2334 mRNA_2335
10699 10700 10701 10702 10703
ypd buoyancy 40 hrs No Buoyancy Separation -1.2 -0.0 N.D. -1.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.3 N.D. -0.5 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.1 N.D. -0.5 -0.0
growth on oleic acid YNB Glucose -0.5 -0.7 N.D. -0.0 +0.2
growth on ricinoleic acid YNB Glucose -0.3 -0.6 N.D. +0.0 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.2 N.D. +0.1 +0.0
growth on ypd YPD -0.3 -0.3 N.D. -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.6 +0.1 N.D. +0.0 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.0 N.D. -0.3 +0.2
auxotrophy YNB Glucose +0.2 -0.8 N.D. +0.0 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4 N.D. -0.1 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.0 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.1 N.D. +0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.0 N.D. -0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 N.D. +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.6 N.D. +0.5 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.6 -0.6 N.D. +0.4 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.0 N.D. -0.2 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.0 N.D. -0.1 -0.0
auxotrophy Dropout Complete +0.7 -0.1 N.D. +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.7 +0.0 N.D. +0.2 +0.1
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