Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10700 and 10701 are separated by 663 nucleotides10701 and 10702 are separated by 231 nucleotides10702 and 10703 are separated by 130 nucleotides10703 and 10704 are separated by 635 nucleotides mRNA_2332: 10700 - KOG1134 Uncharacterized conserved protein, at 638,040 to 641,999 10700 mRNA_2333: 10701 - KOG1159 NADP-dependent flavoprotein reductase, at 642,663 to 645,138 10701 mRNA_2334: 10702 - K17815 EXO5 exonuclease V, at 645,370 to 647,887 10702 mRNA_2335: 10703 - K20098 ERCC6L2 DNA excision repair protein ERCC-6-like 2, at 648,018 to 653,331 10703 mRNA_2336: 10704 - KOG0254 Predicted transporter (major facilitator superfamily), at 653,967 to 656,080 10704
Group Condition mRNA_2332 mRNA_2333 mRNA_2334 mRNA_2335 mRNA_2336
10700 10701 10702 10703 10704
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 N.D. -1.0 +0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.2 -0.1 -0.7
auxotrophy YNB Glucose -0.8 N.D. +0.0 +0.2 -0.2
growth on ricinoleic acid YNB Glucose -0.6 N.D. +0.0 +0.0 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. -0.5 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 N.D. -0.1 -0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 N.D. -0.5 -0.0 +0.0
growth on oleic acid YNB Glucose -0.7 N.D. -0.0 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 N.D. -0.2 +0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 N.D. +0.1 +0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 N.D. +0.1 -0.1 -0.2
growth on ypd YPD -0.3 N.D. -0.1 +0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. -0.1 -0.1 -0.0
auxotrophy Dropout Complete -0.1 N.D. +0.1 +0.3 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.6 N.D. +0.5 +0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.6 N.D. +0.4 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. +0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 N.D. +0.2 +0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.0 N.D. -0.3 +0.2 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 N.D. -0.1 +0.2 +0.1
growth on oleic acid YNB Oleic Acid +0.1 N.D. +0.0 -0.0 +0.0
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