Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10701 and 10702 are separated by 231 nucleotides10702 and 10703 are separated by 130 nucleotides10703 and 10704 are separated by 635 nucleotides10704 and 10705 are separated by 38 nucleotides mRNA_2333: 10701 - KOG1159 NADP-dependent flavoprotein reductase, at 642,663 to 645,138 10701 mRNA_2334: 10702 - K17815 EXO5 exonuclease V, at 645,370 to 647,887 10702 mRNA_2335: 10703 - K20098 ERCC6L2 DNA excision repair protein ERCC-6-like 2, at 648,018 to 653,331 10703 mRNA_2336: 10704 - KOG0254 Predicted transporter (major facilitator superfamily), at 653,967 to 656,080 10704 mRNA_2337: 10705 - BLAST general substrate transporter [Wallemia mellicola..., at 656,119 to 656,520 10705
Group Condition mRNA_2333 mRNA_2334 mRNA_2335 mRNA_2336 mRNA_2337
10701 10702 10703 10704 10705
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.0 +0.1 -0.7 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.1 -0.0 -0.6 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 -0.1 -0.7 -0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.5 +0.1 -0.0 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +0.1 -0.4 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.5 -0.0 +0.0 -0.3
growth on ypd YPD N.D. -0.1 +0.0 +0.0 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.2 +0.1 -0.3 -0.3
growth on oleic acid YNB Oleic Acid N.D. +0.0 -0.0 +0.0 -0.3
auxotrophy Dropout Complete N.D. +0.1 +0.3 -0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 +0.2 +0.0 -0.1
growth on ricinoleic acid YNB Glucose N.D. +0.0 +0.0 -0.2 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 +0.0 -0.2 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.1 -0.1 -0.2 +0.1
auxotrophy YNB Glucose N.D. +0.0 +0.2 -0.2 -0.1
growth on oleic acid YNB Glucose N.D. -0.0 +0.2 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.5 +0.2 -0.3 -0.4
ypd buoyancy 40 hrs High Buoyancy N.D. -0.1 -0.1 -0.0 +0.4
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.2 -0.1 -0.1 +0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.4 +0.1 +0.0 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.2 +0.1 +0.2
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