Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10702 and 10703 are separated by 130 nucleotides10703 and 10704 are separated by 635 nucleotides10704 and 10705 are separated by 38 nucleotides10705 and 10706 are separated by 970 nucleotides mRNA_2334: 10702 - K17815 EXO5 exonuclease V, at 645,370 to 647,887 10702 mRNA_2335: 10703 - K20098 ERCC6L2 DNA excision repair protein ERCC-6-like 2, at 648,018 to 653,331 10703 mRNA_2336: 10704 - KOG0254 Predicted transporter (major facilitator superfamily), at 653,967 to 656,080 10704 mRNA_2337: 10705 - BLAST general substrate transporter [Wallemia mellicola..., at 656,119 to 656,520 10705 mRNA_2338: 10706 - K05545 DUS4 tRNA-dihydrouridine synthase 4, at 657,491 to 659,083 10706
Group Condition mRNA_2334 mRNA_2335 mRNA_2336 mRNA_2337 mRNA_2338
10702 10703 10704 10705 10706
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.1 -0.7 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 -0.6 -0.7 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 +0.1 -0.7 -0.2 +1.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.1 -0.3 -0.3 -0.4
growth on oleic acid YNB Oleic Acid +0.0 -0.0 +0.0 -0.3 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.1 -0.0 -0.4 +0.1
growth on ypd YPD -0.1 +0.0 +0.0 -0.6 -0.1
auxotrophy Dropout Complete +0.1 +0.3 -0.4 -0.1 -0.5
auxotrophy YNB Glucose +0.0 +0.2 -0.2 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.1 -0.4 -0.4 +0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 +0.0 -0.2 +0.0 -0.3
growth on oleic acid YNB Glucose -0.0 +0.2 +0.1 -0.2 -0.4
growth on ricinoleic acid YNB Glucose +0.0 +0.0 -0.2 +0.0 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.0 +0.0 -0.3 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.2 -0.3 -0.4 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.2 +0.1 +0.2 -0.6
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.1 +0.0 -0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 -0.2 +0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 -0.1 +0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.0 +0.4 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.2 +0.0 -0.1 +0.4
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