Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10702 and 10703 are separated by 130 nucleotides
10703 and 10704 are separated by 635 nucleotides
10704 and 10705 are separated by 38 nucleotides
10705 and 10706 are separated by 970 nucleotides
mRNA_2334: 10702 - K17815 EXO5 exonuclease V, at 645,370 to 647,887
10702
mRNA_2335: 10703 - K20098 ERCC6L2 DNA excision repair protein ERCC-6-like 2, at 648,018 to 653,331
10703
mRNA_2336: 10704 - KOG0254 Predicted transporter (major facilitator superfamily), at 653,967 to 656,080
10704
mRNA_2337: 10705 - BLAST general substrate transporter [Wallemia mellicola..., at 656,119 to 656,520
10705
mRNA_2338: 10706 - K05545 DUS4 tRNA-dihydrouridine synthase 4, at 657,491 to 659,083
10706
Group
Condition
mRNA
_2334
mRNA
_2335
mRNA
_2336
mRNA
_2337
mRNA
_2338
10702
10703
10704
10705
10706
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.1
-0.7
-0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
-0.6
-0.7
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
+0.1
-0.7
-0.2
+1.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.1
-0.3
-0.3
-0.4
growth on oleic acid
YNB Oleic Acid
+0.0
-0.0
+0.0
-0.3
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
+0.1
-0.0
-0.4
+0.1
growth on ypd
YPD
-0.1
+0.0
+0.0
-0.6
-0.1
auxotrophy
Dropout Complete
+0.1
+0.3
-0.4
-0.1
-0.5
auxotrophy
YNB Glucose
+0.0
+0.2
-0.2
-0.1
-0.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
+0.1
-0.4
-0.4
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
+0.0
-0.2
+0.0
-0.3
growth on oleic acid
YNB Glucose
-0.0
+0.2
+0.1
-0.2
-0.4
growth on ricinoleic acid
YNB Glucose
+0.0
+0.0
-0.2
+0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.0
+0.0
-0.3
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.5
+0.2
-0.3
-0.4
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.2
+0.1
+0.2
-0.6
auxotrophy
YNB Glucose 75mM Arginine
+0.4
+0.1
+0.0
-0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
-0.2
+0.1
+0.0
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
-0.1
+0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.1
-0.0
+0.4
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.2
+0.0
-0.1
+0.4
remove
mRNA_2334
plot
remove
mRNA_2335
plot
remove
mRNA_2336
remove
mRNA_2337
plot
remove
mRNA_2338
plot