Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10703 and 10704 are separated by 635 nucleotides10704 and 10705 are separated by 38 nucleotides10705 and 10706 are separated by 970 nucleotides10706 and 10707 are separated by 165 nucleotides mRNA_2335: 10703 - K20098 ERCC6L2 DNA excision repair protein ERCC-6-like 2, at 648,018 to 653,331 10703 mRNA_2336: 10704 - KOG0254 Predicted transporter (major facilitator superfamily), at 653,967 to 656,080 10704 mRNA_2337: 10705 - BLAST general substrate transporter [Wallemia mellicola..., at 656,119 to 656,520 10705 mRNA_2338: 10706 - K05545 DUS4 tRNA-dihydrouridine synthase 4, at 657,491 to 659,083 10706 mRNA_2339: 10707 - SUPERFAMILY--SSF55298, at 659,249 to 660,620 10707
Group Condition mRNA_2335 mRNA_2336 mRNA_2337 mRNA_2338 mRNA_2339
10703 10704 10705 10706 10707
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.7 -0.3 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.6 -0.7 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.3 -0.3 -0.4 N.D.
auxotrophy Dropout Complete +0.3 -0.4 -0.1 -0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.3 -0.4 -0.4 N.D.
growth on oleic acid YNB Oleic Acid -0.0 +0.0 -0.3 -0.5 N.D.
auxotrophy YNB Glucose +0.2 -0.2 -0.1 -0.6 N.D.
growth on ypd YPD +0.0 +0.0 -0.6 -0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.2 +0.0 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.4 -0.4 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.0 -0.2 -0.3 N.D.
growth on ricinoleic acid YNB Glucose +0.0 -0.2 +0.0 -0.2 N.D.
growth on oleic acid YNB Glucose +0.2 +0.1 -0.2 -0.4 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 -0.4 +0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.2 +0.1 +0.0 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 +0.3 -0.1 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 +0.1 +0.2 -0.6 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.7 -0.2 +1.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.0 +0.4 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.0 -0.3 +0.5 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.0 -0.1 +0.4 N.D.
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