Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10704 and 10705 are separated by 38 nucleotides10705 and 10706 are separated by 970 nucleotides10706 and 10707 are separated by 165 nucleotides10707 and 10708 are separated by 418 nucleotides mRNA_2336: 10704 - KOG0254 Predicted transporter (major facilitator superfamily), at 653,967 to 656,080 10704 mRNA_2337: 10705 - BLAST general substrate transporter [Wallemia mellicola..., at 656,119 to 656,520 10705 mRNA_2338: 10706 - K05545 DUS4 tRNA-dihydrouridine synthase 4, at 657,491 to 659,083 10706 mRNA_2339: 10707 - SUPERFAMILY--SSF55298, at 659,249 to 660,620 10707 mRNA_2340: 10708 - K06927 DPH6 diphthine-ammonia ligase, at 661,039 to 662,267 10708
Group Condition mRNA_2336 mRNA_2337 mRNA_2338 mRNA_2339 mRNA_2340
10704 10705 10706 10707 10708
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.3 -0.3 N.D. N.D.
auxotrophy Dropout Complete -0.4 -0.1 -0.5 N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6 -0.7 +0.2 N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.4 -0.4 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.3 -0.4 N.D. N.D.
auxotrophy YNB Glucose -0.2 -0.1 -0.6 N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.0 -0.3 -0.5 N.D. N.D.
growth on ypd YPD +0.0 -0.6 -0.1 N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.4 +0.3 N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.0 -0.3 N.D. N.D.
growth on oleic acid YNB Glucose +0.1 -0.2 -0.4 N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.2 -0.3 N.D. N.D.
growth on ricinoleic acid YNB Glucose -0.2 +0.0 -0.2 N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 +0.1 N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.2 -0.6 N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 +0.0 N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.3 -0.1 N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.2 +1.0 N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.0 -0.3 +0.5 N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.1 +0.4 N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.4 +0.0 N.D. N.D.
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