Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10706 and 10707 are separated by 165 nucleotides10707 and 10708 are separated by 418 nucleotides10708 and 10709 are separated by 809 nucleotides10709 and 10710 are separated by 214 nucleotides mRNA_2338: 10706 - K05545 DUS4 tRNA-dihydrouridine synthase 4, at 657,491 to 659,083 10706 mRNA_2339: 10707 - SUPERFAMILY--SSF55298, at 659,249 to 660,620 10707 mRNA_2340: 10708 - K06927 DPH6 diphthine-ammonia ligase, at 661,039 to 662,267 10708 mRNA_2341: 10709 - K03021 RPC2, POLR3B DNA-directed RNA polymerase III subunit RPC2, at 663,077 to 667,244 10709 mRNA_2342: 10710 - Hypothetical Protein, at 667,459 to 669,644 10710
Group Condition mRNA_2338 mRNA_2339 mRNA_2340 mRNA_2341 mRNA_2342
10706 10707 10708 10709 10710
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 N.D. N.D. N.D. -0.0
growth on oleic acid YNB Glucose -0.4 N.D. N.D. N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 N.D. N.D. N.D. -0.0
growth on oleic acid YNB Oleic Acid -0.5 N.D. N.D. N.D. +0.1
growth on ypd YPD -0.1 N.D. N.D. N.D. -0.2
auxotrophy YNB Glucose -0.6 N.D. N.D. N.D. +0.3
auxotrophy Dropout Complete -0.5 N.D. N.D. N.D. +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 N.D. N.D. N.D. +0.0
growth on ricinoleic acid YNB Glucose -0.2 N.D. N.D. N.D. -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 N.D. N.D. N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 N.D. N.D. N.D. +0.0
ypd buoyancy 40 hrs High Buoyancy +0.0 N.D. N.D. N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine -0.4 N.D. N.D. N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.0 N.D. N.D. N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -0.3 N.D. N.D. N.D. +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 N.D. N.D. N.D. -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 N.D. N.D. N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 N.D. N.D. N.D. +0.3
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. N.D. N.D. +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +1.0 N.D. N.D. N.D. +0.2
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