Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10707 and 10708 are separated by 418 nucleotides10708 and 10709 are separated by 809 nucleotides10709 and 10710 are separated by 214 nucleotides10710 and 10711 are separated by 170 nucleotides mRNA_2339: 10707 - SUPERFAMILY--SSF55298, at 659,249 to 660,620 10707 mRNA_2340: 10708 - K06927 DPH6 diphthine-ammonia ligase, at 661,039 to 662,267 10708 mRNA_2341: 10709 - K03021 RPC2, POLR3B DNA-directed RNA polymerase III subunit RPC2, at 663,077 to 667,244 10709 mRNA_2342: 10710 - Hypothetical Protein, at 667,459 to 669,644 10710 mRNA_2343: 10711 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 669,815 to 670,967 10711
Group Condition mRNA_2339 mRNA_2340 mRNA_2341 mRNA_2342 mRNA_2343
10707 10708 10709 10710 10711
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. N.D. -0.2 -1.6
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. N.D. -0.0 -1.4
growth on ypd YPD N.D. N.D. N.D. -0.2 -0.5
growth on ricinoleic acid YNB Glucose N.D. N.D. N.D. -0.1 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. N.D. +0.1 -0.7
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. N.D. +0.2 -0.5
growth on oleic acid YNB Glucose N.D. N.D. N.D. -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. N.D. -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. N.D. -0.0 +0.0
auxotrophy Dropout Complete N.D. N.D. N.D. +0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. N.D. +0.2 -0.0
auxotrophy YNB Glucose N.D. N.D. N.D. +0.3 -0.1
growth on oleic acid YNB Oleic Acid N.D. N.D. N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. N.D. +0.4 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. N.D. +0.0 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. N.D. -0.0 +0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. N.D. +0.3 +0.0
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. N.D. +0.4 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. N.D. +0.0 +0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. N.D. +0.1 +0.7
remove
mRNA_2339
plot
remove
mRNA_2340
plot
remove
mRNA_2341
remove
mRNA_2342
plot
remove
mRNA_2343
plot