Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10714 and 10715 are separated by 378 nucleotides10715 and 10716 are separated by 2372 nucleotides10716 and 10717 are separated by 282 nucleotides10717 and 10718 are separated by 285 nucleotides mRNA_2346: 10714 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 675,723 to 677,238 10714 mRNA_2347: 10715 - K09207 KLF6_7 krueppel-like factor 6/7, at 677,617 to 679,955 10715 mRNA_2348: 10716 - K00762 pyrE orotate phosphoribosyltransferase, at 682,328 to 683,011 10716 mRNA_2349: 10717 - KOG3419 Mitochondrial/chloroplast ribosomal protein S16, at 683,294 to 683,869 10717 mRNA_2350: 10718 - K14829 IPI3 pre-rRNA-processing protein IPI3, at 684,155 to 686,161 10718
Group Condition mRNA_2346 mRNA_2347 mRNA_2348 mRNA_2349 mRNA_2350
10714 10715 10716 10717 10718
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.4 N.D. N.D. N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.3 N.D. N.D. N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.0 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.1 N.D. N.D. N.D.
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 N.D. N.D. N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 N.D. N.D. N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.1 N.D. N.D. N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.3 N.D. N.D. N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.2 N.D. N.D. N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.2 N.D. N.D. N.D.
growth on oleic acid YNB Glucose +0.0 +0.2 N.D. N.D. N.D.
auxotrophy YNB Glucose +0.2 +0.0 N.D. N.D. N.D.
growth on ypd YPD +0.3 +0.0 N.D. N.D. N.D.
growth on oleic acid YNB Oleic Acid +0.7 -0.2 N.D. N.D. N.D.
auxotrophy Dropout Complete +0.5 -0.0 N.D. N.D. N.D.
growth on ricinoleic acid YNB Ricinoleic Acid +0.9 -0.2 N.D. N.D. N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.4 N.D. N.D. N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid +0.9 +0.0 N.D. N.D. N.D.
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