Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10719 and 10720 are separated by 805 nucleotides10720 and 10721 are separated by 410 nucleotides10721 and 10722 are separated by 132 nucleotides10722 and 10723 are separated by 67 nucleotides mRNA_2351: 10719 - Hypothetical Protein, at 687,521 to 688,021 10719 mRNA_2352: 10720 - K02903 RP-L28e, RPL28 large subunit ribosomal protein L28e, at 688,827 to 689,561 10720 mRNA_2353: 10721 - SUPERFAMILY--SSF88713, at 689,972 to 692,124 10721 mRNA_2354: 10722 - K01580 E4.1.1.15, gadB, gadA, GAD glutamate decarboxylase, at 692,257 to 694,787 10722 mRNA_2355: 10723 - Hypothetical Protein, at 694,855 to 695,610 10723
Group Condition mRNA_2351 mRNA_2352 mRNA_2353 mRNA_2354 mRNA_2355
10719 10720 10721 10722 10723
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -1.7 +0.1 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.7 -0.1 +0.2 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 -1.1 -0.1 -0.0 -0.2
auxotrophy YNB Glucose +0.4 -0.8 -0.1 +0.2 -0.4
auxotrophy YNB Glucose 75mM Arginine +0.4 -1.2 +0.1 +0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.3 -1.0 -0.2 +0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.0 -0.1 +0.0 -0.5
growth on oleic acid YNB Glucose -0.1 +0.5 +0.0 -0.1 -0.6
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 -1.1 +0.2 +0.3 +0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.8 -0.1 -0.2 -0.6
auxotrophy Dropout Complete +0.4 -0.6 +0.1 +0.0 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.0 -0.2 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +1.3 -0.2 -0.2 -0.8
growth on ricinoleic acid YNB Glucose +0.1 +0.4 -0.1 -0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.0 +0.4 -0.2 +0.3 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.5 -0.1 +0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.9 +0.1 +0.3 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 +0.4 -0.1 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +1.2 -0.2 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 +1.5 -0.4 +0.2 -0.2
growth on ypd YPD -0.4 +1.7 -0.1 +0.2 +0.7
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