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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10723 and 10724 are separated by 857 nucleotides
10724 and 10725 are separated by 1199 nucleotides
10725 and 10726 are separated by 0 nucleotides
10726 and 10727 are separated by 213 nucleotides
mRNA_2355: 10723 - Hypothetical Protein, at 694,855 to 695,610
10723
mRNA_2356: 10724 - Hypothetical Protein, at 696,468 to 697,388
10724
mRNA_2357: 10725 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 698,588 to 700,327
10725
mRNA_2358: 10726 - Hypothetical Protein, at 700,328 to 700,780
10726
mRNA_2359: 10727 - K02927 RP-L40e, RPL40 large subunit ribosomal protein L40e, at 700,994 to 701,674
10727
Group
Condition
mRNA
_2355
mRNA
_2356
mRNA
_2357
mRNA
_2358
mRNA
_2359
10723
10724
10725
10726
10727
growth on oleic acid
YNB Glucose
-0.6
-0.2
-0.2
-1.4
N.D.
growth on oleic acid
YNB Oleic Acid
-0.6
+0.0
-0.3
-1.4
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
-0.4
+0.1
-0.5
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.1
+0.8
-1.4
N.D.
auxotrophy
YNB Glucose
-0.4
-0.1
-0.5
+0.4
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
-0.1
-0.4
-0.1
N.D.
ypd buoyancy
40 hrs Median Buoyancy
-0.5
+0.4
-0.4
+0.0
N.D.
auxotrophy
Dropout Complete
+0.0
+0.2
+0.1
-0.4
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.4
-0.0
+0.2
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.7
-0.4
+0.3
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.2
+0.2
-0.3
+0.7
N.D.
growth on ypd
YPD
+0.7
-0.1
-0.4
+0.3
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
+0.0
-0.0
+1.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.7
-1.0
+1.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.1
-0.4
+2.1
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
+0.1
-0.3
+1.9
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
+0.4
+0.6
+1.7
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.1
+0.3
+1.6
N.D.
growth on ricinoleic acid
YNB Glucose
+0.2
-0.5
+0.8
+1.5
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.3
+0.8
+1.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.1
-0.3
+2.3
N.D.
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