Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10724 and 10725 are separated by 1199 nucleotides10725 and 10726 are separated by 0 nucleotides10726 and 10727 are separated by 213 nucleotides10727 and 10728 are separated by 836 nucleotides mRNA_2356: 10724 - Hypothetical Protein, at 696,468 to 697,388 10724 mRNA_2357: 10725 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 698,588 to 700,327 10725 mRNA_2358: 10726 - Hypothetical Protein, at 700,328 to 700,780 10726 mRNA_2359: 10727 - K02927 RP-L40e, RPL40 large subunit ribosomal protein L40e, at 700,994 to 701,674 10727 mRNA_2360: 10728 - Hypothetical Protein, at 702,511 to 702,996 10728
Group Condition mRNA_2356 mRNA_2357 mRNA_2358 mRNA_2359 mRNA_2360
10724 10725 10726 10727 10728
growth on oleic acid YNB Glucose -0.2 -0.2 -1.4 N.D. -0.6
growth on oleic acid YNB Oleic Acid +0.0 -0.3 -1.4 N.D. -0.2
growth on ypd YPD -0.1 -0.4 +0.3 N.D. -1.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.1 -0.5 N.D. -0.5
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.8 -1.4 N.D. -0.5
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 -1.0 +1.1 N.D. -1.4
ypd buoyancy 40 hrs High Buoyancy +0.4 -0.0 +0.2 N.D. -1.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 -0.1 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.0 +1.0 N.D. -1.1
auxotrophy YNB Glucose -0.1 -0.5 +0.4 N.D. +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.4 -0.4 +0.0 N.D. +0.1
auxotrophy Dropout Complete +0.2 +0.1 -0.4 N.D. +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.3 +2.3 N.D. -1.8
auxotrophy YNB Glucose 75mM Arginine +0.2 -0.3 +0.7 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.7 -0.4 +0.3 N.D. +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.3 +1.9 N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.4 +2.1 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.8 +1.3 N.D. -0.2
growth on ricinoleic acid YNB Glucose -0.5 +0.8 +1.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.6 +1.7 N.D. -0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.3 +1.6 N.D. +0.3
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