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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10724 and 10725 are separated by 1199 nucleotides
10725 and 10726 are separated by 0 nucleotides
10726 and 10727 are separated by 213 nucleotides
10727 and 10728 are separated by 836 nucleotides
mRNA_2356: 10724 - Hypothetical Protein, at 696,468 to 697,388
10724
mRNA_2357: 10725 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 698,588 to 700,327
10725
mRNA_2358: 10726 - Hypothetical Protein, at 700,328 to 700,780
10726
mRNA_2359: 10727 - K02927 RP-L40e, RPL40 large subunit ribosomal protein L40e, at 700,994 to 701,674
10727
mRNA_2360: 10728 - Hypothetical Protein, at 702,511 to 702,996
10728
Group
Condition
mRNA
_2356
mRNA
_2357
mRNA
_2358
mRNA
_2359
mRNA
_2360
10724
10725
10726
10727
10728
growth on oleic acid
YNB Glucose
-0.2
-0.2
-1.4
N.D.
-0.6
growth on oleic acid
YNB Oleic Acid
+0.0
-0.3
-1.4
N.D.
-0.2
growth on ypd
YPD
-0.1
-0.4
+0.3
N.D.
-1.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.1
-0.5
N.D.
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.8
-1.4
N.D.
-0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.7
-1.0
+1.1
N.D.
-1.4
ypd buoyancy
40 hrs High Buoyancy
+0.4
-0.0
+0.2
N.D.
-1.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
-0.4
-0.1
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-0.0
+1.0
N.D.
-1.1
auxotrophy
YNB Glucose
-0.1
-0.5
+0.4
N.D.
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.4
-0.4
+0.0
N.D.
+0.1
auxotrophy
Dropout Complete
+0.2
+0.1
-0.4
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
-0.3
+2.3
N.D.
-1.8
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.3
+0.7
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.7
-0.4
+0.3
N.D.
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.3
+1.9
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.4
+2.1
N.D.
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
+0.8
+1.3
N.D.
-0.2
growth on ricinoleic acid
YNB Glucose
-0.5
+0.8
+1.5
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.6
+1.7
N.D.
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+0.3
+1.6
N.D.
+0.3
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