Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10732 and 10733 are separated by 750 nucleotides10733 and 10734 are separated by 489 nucleotides10734 and 10735 are separated by 677 nucleotides10735 and 10736 are separated by 634 nucleotides mRNA_2364: 10732 - K20471 COPD, ARCN1, RET2 coatomer subunit delta, at 712,006 to 714,085 10732 mRNA_2365: 10733 - HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 714,836 to 719,439 10733 mRNA_2366: 10734 - HMMPfam-GDP/GTP exchange factor Sec2p-PF06428,SUPERFAMILY--SSF144284, at 719,929 to 722,612 10734 mRNA_2367: 10735 - HMMPfam-Salt tolerance down-regulator-PF13945, at 723,290 to 728,071 10735 mRNA_2368: 10736 - Hypothetical Protein, at 728,706 to 728,915 10736
Group Condition mRNA_2364 mRNA_2365 mRNA_2366 mRNA_2367 mRNA_2368
10732 10733 10734 10735 10736
growth on ricinoleic acid YNB Methylricinoleic Acid +1.3 -2.6 +0.4 N.D. +0.3
facs on lipid accumulation Sorted Low BODIPY Gate -0.7 -0.3 +0.3 N.D. -0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.7 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.6 -1.2 +0.3 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 -0.8 +0.4 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +1.4 -2.5 +0.2 N.D. +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.6 -0.8 +0.3 N.D. -0.0
growth on ricinoleic acid YNB Glucose +0.3 -1.1 +0.1 N.D. +0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.4 -0.2 N.D. +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.6 +0.5 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.0 +0.4 N.D. -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.3 -0.5 +0.0 N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.9 -1.0 -0.0 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.6 +0.4 N.D. +0.5
growth on ypd YPD +0.4 +0.5 -0.0 N.D. +0.2
growth on oleic acid YNB Glucose +0.5 -0.3 +0.3 N.D. +0.6
auxotrophy YNB Glucose +1.0 -0.7 +0.0 N.D. +1.0
growth on oleic acid YNB Oleic Acid +0.9 -0.2 +0.2 N.D. +0.5
auxotrophy YNB Glucose 75mM Arginine +1.1 -0.4 +0.0 N.D. +0.8
auxotrophy YNB Glucose 75mM Methionine +1.4 -0.6 +0.0 N.D. +0.8
auxotrophy Dropout Complete +1.8 +0.0 -0.1 N.D. +0.8
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