Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10732 and 10733 are separated by 750 nucleotides
10733 and 10734 are separated by 489 nucleotides
10734 and 10735 are separated by 677 nucleotides
10735 and 10736 are separated by 634 nucleotides
mRNA_2364: 10732 - K20471 COPD, ARCN1, RET2 coatomer subunit delta, at 712,006 to 714,085
10732
mRNA_2365: 10733 - HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 714,836 to 719,439
10733
mRNA_2366: 10734 - HMMPfam-GDP/GTP exchange factor Sec2p-PF06428,SUPERFAMILY--SSF144284, at 719,929 to 722,612
10734
mRNA_2367: 10735 - HMMPfam-Salt tolerance down-regulator-PF13945, at 723,290 to 728,071
10735
mRNA_2368: 10736 - Hypothetical Protein, at 728,706 to 728,915
10736
Group
Condition
mRNA
_2364
mRNA
_2365
mRNA
_2366
mRNA
_2367
mRNA
_2368
10732
10733
10734
10735
10736
growth on ricinoleic acid
YNB Methylricinoleic Acid
+1.3
-2.6
+0.4
N.D.
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.7
-0.3
+0.3
N.D.
-0.0
ypd buoyancy
40 hrs High Buoyancy
+0.2
-0.7
-0.0
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.6
-1.2
+0.3
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.8
+0.4
N.D.
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.4
-2.5
+0.2
N.D.
+0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.6
-0.8
+0.3
N.D.
-0.0
growth on ricinoleic acid
YNB Glucose
+0.3
-1.1
+0.1
N.D.
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.4
-0.2
N.D.
+0.6
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
-0.6
+0.5
N.D.
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.0
+0.4
N.D.
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.3
-0.5
+0.0
N.D.
+0.4
ypd buoyancy
40 hrs Low Buoyancy
+0.9
-1.0
-0.0
N.D.
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
-0.6
+0.4
N.D.
+0.5
growth on ypd
YPD
+0.4
+0.5
-0.0
N.D.
+0.2
growth on oleic acid
YNB Glucose
+0.5
-0.3
+0.3
N.D.
+0.6
auxotrophy
YNB Glucose
+1.0
-0.7
+0.0
N.D.
+1.0
growth on oleic acid
YNB Oleic Acid
+0.9
-0.2
+0.2
N.D.
+0.5
auxotrophy
YNB Glucose 75mM Arginine
+1.1
-0.4
+0.0
N.D.
+0.8
auxotrophy
YNB Glucose 75mM Methionine
+1.4
-0.6
+0.0
N.D.
+0.8
auxotrophy
Dropout Complete
+1.8
+0.0
-0.1
N.D.
+0.8
remove
mRNA_2364
plot
remove
mRNA_2365
plot
remove
mRNA_2366
remove
mRNA_2367
plot
remove
mRNA_2368
plot