Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10733 and 10734 are separated by 489 nucleotides10734 and 10735 are separated by 677 nucleotides10735 and 10736 are separated by 634 nucleotides10736 and 10737 are separated by 1640 nucleotides mRNA_2365: 10733 - HMMPfam-C2 domain-PF00168,HMMPfam-Munc13 (mammalian uncoordinated) homology domain-PF10540,ProSiteProfiles-Munc13-homology domain 1 (MHD1) profile.-PS51258,ProSiteProfiles-Munc13-homology domain 2 (MHD2) profile.-PS51259,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 714,836 to 719,439 10733 mRNA_2366: 10734 - HMMPfam-GDP/GTP exchange factor Sec2p-PF06428,SUPERFAMILY--SSF144284, at 719,929 to 722,612 10734 mRNA_2367: 10735 - HMMPfam-Salt tolerance down-regulator-PF13945, at 723,290 to 728,071 10735 mRNA_2368: 10736 - Hypothetical Protein, at 728,706 to 728,915 10736 mRNA_2369: 10737 - K02997 RP-S9e, RPS9 small subunit ribosomal protein S9e, at 730,556 to 731,871 10737
Group Condition mRNA_2365 mRNA_2366 mRNA_2367 mRNA_2368 mRNA_2369
10733 10734 10735 10736 10737
growth on ricinoleic acid YNB Methylricinoleic Acid -2.6 +0.4 N.D. +0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -2.5 +0.2 N.D. +0.8 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -1.2 +0.3 N.D. -0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.7 -0.0 N.D. -0.1 N.D.
ypd buoyancy 40 hrs Low Buoyancy -1.0 -0.0 N.D. +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.8 +0.4 N.D. -0.2 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.3 N.D. -0.0 N.D.
growth on ricinoleic acid YNB Glucose -1.1 +0.1 N.D. +0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.5 +0.0 N.D. +0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.5 N.D. +0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.3 N.D. -0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.2 N.D. +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.4 N.D. -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.0 N.D. +0.8 N.D.
auxotrophy YNB Glucose -0.7 +0.0 N.D. +1.0 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.6 +0.4 N.D. +0.5 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.4 +0.0 N.D. +0.8 N.D.
growth on oleic acid YNB Oleic Acid -0.2 +0.2 N.D. +0.5 N.D.
growth on oleic acid YNB Glucose -0.3 +0.3 N.D. +0.6 N.D.
growth on ypd YPD +0.5 -0.0 N.D. +0.2 N.D.
auxotrophy Dropout Complete +0.0 -0.1 N.D. +0.8 N.D.
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