Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10738 and 10739 are separated by 20 nucleotides10739 and 10740 are separated by 2030 nucleotides10740 and 10741 are separated by 751 nucleotides10741 and 10742 are separated by 1216 nucleotides mRNA_2370: 10738 - K01410 MIPEP mitochondrial intermediate peptidase, at 732,423 to 734,982 10738 mRNA_2371: 10739 - BLAST Tubulin beta-2 chain [Grifola frondosa], at 735,003 to 736,788 10739 mRNA_2372: 10740 - Hypothetical Protein, at 738,819 to 739,851 10740 mRNA_2373: 10741 - K08286 E2.7.11.- protein-serine/threonine kinase, at 740,603 to 745,355 10741 mRNA_2374: 10742 - K12897 TRA2 transformer-2 protein, at 746,572 to 748,318 10742
Group Condition mRNA_2370 mRNA_2371 mRNA_2372 mRNA_2373 mRNA_2374
10738 10739 10740 10741 10742
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -1.9 +0.0 -0.4 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.6 -0.2 -0.8 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 -0.3 -0.8 N.D.
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 -0.2 -0.7 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 +0.1 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.6 -0.4 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.2 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 +0.1 +0.1 N.D.
growth on ypd YPD N.D. -0.1 +0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 -0.1 +0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 +0.2 +0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.5 +0.4 +0.6 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. +0.0 +0.3 +0.3 N.D.
auxotrophy YNB Glucose N.D. -0.8 +0.7 +0.8 N.D.
growth on oleic acid YNB Glucose N.D. +0.0 +0.3 +0.4 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.1 +0.2 +0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.5 +0.1 +0.2 N.D.
auxotrophy Dropout Complete N.D. -0.2 +0.8 +0.5 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.3 +1.3 +0.8 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.4 +1.0 +1.5 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.3 +1.8 +1.4 N.D.
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