Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10744 and 10745 are separated by 321 nucleotides10745 and 10746 are separated by 983 nucleotides10746 and 10747 are separated by 138 nucleotides10747 and 10748 are separated by 364 nucleotides mRNA_2376: 10744 - Hypothetical Protein, at 749,688 to 751,493 10744 mRNA_2377: 10745 - KOG0725 Reductases with broad range of substrate specificities, at 751,815 to 752,999 10745 mRNA_2378: 10746 - Hypothetical Protein, at 753,983 to 754,459 10746 mRNA_2379: 10747 - HMMPfam-DASH complex subunit Duo1-PF08651, at 754,598 to 756,012 10747 mRNA_2380: 10748 - K07889 RAB5C Ras-related protein Rab-5C, at 756,377 to 757,308 10748
Group Condition mRNA_2376 mRNA_2377 mRNA_2378 mRNA_2379 mRNA_2380
10744 10745 10746 10747 10748
ypd buoyancy 40 hrs Median Buoyancy -0.5 -0.0 -0.9 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.2 -0.2 -0.8 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 +0.2 +0.1 -0.7 -0.6
growth on ypd YPD -0.6 -0.5 -0.5 +0.2 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 +0.0 +0.0 -0.3 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.1 +0.5 +0.2 -0.7
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.5 -0.1 -0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 +0.2 +0.1 -0.3 -0.1
auxotrophy YNB Glucose -0.2 -0.4 +0.1 -0.2 +0.3
growth on oleic acid YNB Glucose -0.1 -0.3 -0.3 +0.0 +0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.0 -0.1 +0.0 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 -0.4 +0.1 -0.3 +0.1
auxotrophy Dropout Complete -0.3 -0.4 +0.0 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 -0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 +0.4 +0.0 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.5 +0.2 -0.2 +0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 +0.4 -0.4 +0.3
growth on oleic acid YNB Oleic Acid +0.1 -0.3 +0.5 +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.4 +1.5 +0.5 -0.9
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.3 +1.4 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.2 +1.3 -0.3 +0.4
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