Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10750 and 10751 are separated by 590 nucleotides10751 and 10752 are separated by 19 nucleotides10752 and 10753 are separated by 279 nucleotides10753 and 10754 are separated by 471 nucleotides mRNA_2382: 10750 - HMMPfam-Zinc-binding loop region of homing endonuclease-PF05551,SUPERFAMILY--SSF54060, at 760,691 to 762,074 10750 mRNA_2383: 10751 - Hypothetical Protein, at 762,665 to 764,140 10751 mRNA_2384: 10752 - K11600 RRP41, EXOSC4, SKI6 exosome complex component RRP41, at 764,160 to 765,511 10752 mRNA_2385: 10753 - K01885 EARS, gltX glutamyl-tRNA synthetase, at 765,791 to 769,298 10753 mRNA_2386: 10754 - K01530 E3.6.3.1 phospholipid-translocating ATPase, at 769,770 to 774,280 10754
Group Condition mRNA_2382 mRNA_2383 mRNA_2384 mRNA_2385 mRNA_2386
10750 10751 10752 10753 10754
ypd buoyancy 40 hrs High Buoyancy N.D. -0.2 N.D. N.D. -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.6 N.D. N.D. +0.2
growth on ypd YPD N.D. -0.2 N.D. N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.0 N.D. N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 N.D. N.D. +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.3 N.D. N.D. +0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 N.D. N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 N.D. N.D. +0.5
growth on oleic acid YNB Glucose N.D. -0.1 N.D. N.D. +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.0 N.D. N.D. +0.5
growth on ricinoleic acid YNB Glucose N.D. +0.0 N.D. N.D. +0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 N.D. N.D. +0.4
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.4 N.D. N.D. +0.3
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.4 N.D. N.D. +0.4
growth on oleic acid YNB Oleic Acid N.D. -0.0 N.D. N.D. +1.0
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 N.D. N.D. +1.1
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 N.D. N.D. +1.3
auxotrophy Dropout Complete N.D. -0.1 N.D. N.D. +1.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.0 N.D. N.D. +1.2
auxotrophy YNB Glucose N.D. -0.0 N.D. N.D. +1.4
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