Fitness for 4 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10756 and 10757 are separated by 900 nucleotides10757 and 10758 are separated by 709 nucleotides10758 and 10759 are separated by 324 nucleotides mRNA_2388: 10756 - K14781 DHR2 ATP-dependent RNA helicase DHR2, at 595 to 3,686 10756 mRNA_2389: 10757 - K10901 BLM, RECQL3, SGS1 bloom syndrome protein, at 4,587 to 7,344 10757 mRNA_2390: 10758 - Hypothetical Protein, at 8,054 to 9,276 10758 mRNA_2391: 10759 - HMMPfam-Chaperone for protein-folding within the ER, fungal-PF10681, at 9,601 to 10,907 10759
Group Condition mRNA_2388 mRNA_2389 mRNA_2390 mRNA_2391
10756 10757 10758 10759
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.5 -0.3 N.D.
growth on oleic acid YNB Oleic Acid N.D. -0.1 -0.5 N.D.
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.5 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.1 -0.4 N.D.
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.3 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.0 -0.4 N.D.
auxotrophy Dropout Complete N.D. -0.4 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine N.D. -0.3 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 -0.5 N.D.
growth on oleic acid YNB Glucose N.D. -0.1 -0.1 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.4 +0.3 N.D.
auxotrophy YNB Glucose N.D. -0.2 +0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 -0.1 N.D.
auxotrophy YNB Glucose 75mM Methionine N.D. -0.2 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.0 +0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.3 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.1 +0.2 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.3 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.5 +0.1 N.D.
growth on ypd YPD N.D. +0.1 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.4 +0.5 N.D.
remove
mRNA_2388
plot
remove
mRNA_2389
remove
mRNA_2390
plot
remove
mRNA_2391
plot