Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10757 and 10758 are separated by 709 nucleotides10758 and 10759 are separated by 324 nucleotides10759 and 10760 are separated by 309 nucleotides10760 and 10761 are separated by 328 nucleotides mRNA_2389: 10757 - K10901 BLM, RECQL3, SGS1 bloom syndrome protein, at 4,587 to 7,344 10757 mRNA_2390: 10758 - Hypothetical Protein, at 8,054 to 9,276 10758 mRNA_2391: 10759 - HMMPfam-Chaperone for protein-folding within the ER, fungal-PF10681, at 9,601 to 10,907 10759 mRNA_2392: 10760 - K10364 CAPZA capping protein (actin filament) muscle Z-line, alpha, at 11,217 to 13,113 10760 mRNA_2393: 10761 - HMMPfam-Prolyl oligopeptidase family-PF00326,HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 13,442 to 14,834 10761
Group Condition mRNA_2389 mRNA_2390 mRNA_2391 mRNA_2392 mRNA_2393
10757 10758 10759 10760 10761
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.4 N.D. +0.1 -0.8
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 N.D. -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.3 N.D. +0.3 +0.2
growth on oleic acid YNB Glucose -0.1 -0.1 N.D. +0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.0 N.D. +0.1 -0.0
growth on ypd YPD +0.1 +0.5 N.D. -0.6 -0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.5 N.D. +0.7 -0.3
auxotrophy Dropout Complete -0.4 -0.0 N.D. +0.3 -0.0
growth on ricinoleic acid YNB Glucose -0.0 -0.5 N.D. +0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.1 N.D. +0.0 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.2 N.D. -0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.4 N.D. -0.2 +0.0
auxotrophy YNB Glucose -0.2 +0.1 N.D. +0.3 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 N.D. +0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 N.D. +0.0 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.4 N.D. +1.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.5 N.D. +0.7 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.1 N.D. -0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.1 N.D. +0.5 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.3 N.D. +0.5 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.5 N.D. -0.2 +0.2
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