Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10758 and 10759 are separated by 324 nucleotides10759 and 10760 are separated by 309 nucleotides10760 and 10761 are separated by 328 nucleotides10761 and 10762 are separated by 298 nucleotides mRNA_2390: 10758 - Hypothetical Protein, at 8,054 to 9,276 10758 mRNA_2391: 10759 - HMMPfam-Chaperone for protein-folding within the ER, fungal-PF10681, at 9,601 to 10,907 10759 mRNA_2392: 10760 - K10364 CAPZA capping protein (actin filament) muscle Z-line, alpha, at 11,217 to 13,113 10760 mRNA_2393: 10761 - HMMPfam-Prolyl oligopeptidase family-PF00326,HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 13,442 to 14,834 10761 mRNA_2394: 10762 - K03648 UNG, UDG uracil-DNA glycosylase, at 15,133 to 16,619 10762
Group Condition mRNA_2390 mRNA_2391 mRNA_2392 mRNA_2393 mRNA_2394
10758 10759 10760 10761 10762
ypd buoyancy 40 hrs Low Buoyancy -0.3 N.D. -0.3 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 N.D. +0.1 -0.8 +0.3
growth on ypd YPD +0.5 N.D. -0.6 -0.1 -0.0
growth on oleic acid YNB Glucose -0.1 N.D. +0.1 -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 N.D. -0.3 -0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.1 N.D. +0.0 -0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.5 N.D. +0.7 -0.3 +0.1
growth on ricinoleic acid YNB Glucose -0.5 N.D. +0.4 +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.4 N.D. -0.2 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 N.D. +0.1 -0.0 +0.2
auxotrophy Dropout Complete -0.0 N.D. +0.3 -0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 N.D. +0.1 +0.1 +0.1
auxotrophy YNB Glucose +0.1 N.D. +0.3 +0.0 +0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 N.D. +0.3 +0.2 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 N.D. +0.7 +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 N.D. -0.0 +0.2 +0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 N.D. +1.1 +0.0 +0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.3 N.D. +0.5 +0.5 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 N.D. +0.0 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 N.D. -0.2 +0.2 +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 N.D. +0.5 +0.2 +0.4
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