Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10759 and 10760 are separated by 309 nucleotides10760 and 10761 are separated by 328 nucleotides10761 and 10762 are separated by 298 nucleotides10762 and 10763 are separated by 248 nucleotides mRNA_2391: 10759 - HMMPfam-Chaperone for protein-folding within the ER, fungal-PF10681, at 9,601 to 10,907 10759 mRNA_2392: 10760 - K10364 CAPZA capping protein (actin filament) muscle Z-line, alpha, at 11,217 to 13,113 10760 mRNA_2393: 10761 - HMMPfam-Prolyl oligopeptidase family-PF00326,HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 13,442 to 14,834 10761 mRNA_2394: 10762 - K03648 UNG, UDG uracil-DNA glycosylase, at 15,133 to 16,619 10762 mRNA_2395: 10763 - SMART-catalytic domain of ctd-like phosphatases-SM00577, at 16,868 to 18,999 10763
Group Condition mRNA_2391 mRNA_2392 mRNA_2393 mRNA_2394 mRNA_2395
10759 10760 10761 10762 10763
growth on ypd YPD N.D. -0.6 -0.1 -0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.3 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.1 -0.8 +0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 +0.0 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 -0.1 -0.0 -0.1
growth on oleic acid YNB Glucose N.D. +0.1 -0.2 -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 -0.1 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.1 -0.0 +0.2 -0.3
auxotrophy Dropout Complete N.D. +0.3 -0.0 +0.1 -0.0
auxotrophy YNB Glucose N.D. +0.3 +0.0 +0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.1 +0.1 +0.0
growth on ricinoleic acid YNB Glucose N.D. +0.4 +0.1 +0.2 -0.2
growth on oleic acid YNB Oleic Acid N.D. +0.7 -0.3 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.2 +0.2 +0.5 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.5 +0.5 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.0 +0.2 +0.6 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. +0.5 +0.2 +0.4 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.2 +0.5 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.7 +0.3 +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.3 +0.2 +0.5 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +1.1 +0.0 +0.3 -0.0
remove
mRNA_2391
plot
remove
mRNA_2392
plot
remove
mRNA_2393
remove
mRNA_2394
plot
remove
mRNA_2395
plot