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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10765 and 10766 are separated by 97 nucleotides
10766 and 10767 are separated by 229 nucleotides
10767 and 10768 are separated by 273 nucleotides
10768 and 10769 are separated by 390 nucleotides
mRNA_2397: 10765 - Hypothetical Protein, at 21,326 to 23,910
10765
mRNA_2398: 10766 - SUPERFAMILY--SSF52047, at 24,008 to 25,280
10766
mRNA_2399: 10767 - Hypothetical Protein, at 25,510 to 29,581
10767
mRNA_2400: 10768 - Hypothetical Protein, at 29,855 to 31,003
10768
mRNA_2401: 10769 - HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300, at 31,394 to 33,493
10769
Group
Condition
mRNA
_2397
mRNA
_2398
mRNA
_2399
mRNA
_2400
mRNA
_2401
10765
10766
10767
10768
10769
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.6
+0.1
-0.3
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.6
+0.2
+0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.0
-0.2
+0.0
-0.3
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.4
+0.3
+0.1
-0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
-0.7
-0.1
+0.1
+0.5
ypd buoyancy
40 hrs Median Buoyancy
+0.0
-0.1
-0.1
-0.2
+0.2
auxotrophy
Dropout Complete
+0.1
-0.2
-0.1
+0.0
+0.1
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.0
+0.1
-0.2
+0.1
growth on ricinoleic acid
YNB Glucose
+0.0
+0.1
+0.0
+0.1
-0.3
growth on ypd
YPD
-0.0
-0.1
+0.1
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.2
-0.0
-0.1
-0.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.1
+0.1
+0.4
-0.2
growth on oleic acid
YNB Oleic Acid
+0.1
-0.1
+0.1
+0.2
-0.0
auxotrophy
YNB Glucose
+0.3
-0.0
-0.1
+0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
+0.1
+0.3
+0.0
growth on oleic acid
YNB Glucose
+0.1
+0.1
+0.2
+0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.3
-0.1
+0.2
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.2
+0.2
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.3
+0.5
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.5
+0.3
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.4
+0.5
+0.5
+0.1
+0.1
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