Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10766 and 10767 are separated by 229 nucleotides10767 and 10768 are separated by 273 nucleotides10768 and 10769 are separated by 390 nucleotides10769 and 10770 are separated by 172 nucleotides mRNA_2398: 10766 - SUPERFAMILY--SSF52047, at 24,008 to 25,280 10766 mRNA_2399: 10767 - Hypothetical Protein, at 25,510 to 29,581 10767 mRNA_2400: 10768 - Hypothetical Protein, at 29,855 to 31,003 10768 mRNA_2401: 10769 - HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300, at 31,394 to 33,493 10769 mRNA_2402: 10770 - K07870 RHOT1, ARHT1 Ras homolog gene family, member T1, at 33,666 to 36,845 10770
Group Condition mRNA_2398 mRNA_2399 mRNA_2400 mRNA_2401 mRNA_2402
10766 10767 10768 10769 10770
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 +0.1 -0.3 -0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.6 +0.2 +0.0 -0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.0 -0.3 -0.0 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 -0.1 +0.1 +0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 +0.3 +0.1 -0.4 +0.1
growth on ypd YPD -0.1 +0.1 +0.2 -0.1 -0.4
auxotrophy Dropout Complete -0.2 -0.1 +0.0 +0.1 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 -0.0 +0.2 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.2 +0.2 +0.2
growth on oleic acid YNB Oleic Acid -0.1 +0.1 +0.2 -0.0 -0.1
auxotrophy YNB Glucose -0.0 -0.1 +0.2 +0.1 +0.0
growth on ricinoleic acid YNB Glucose +0.1 +0.0 +0.1 -0.3 +0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 -0.2 +0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.1 +0.3 +0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.1 +0.4 -0.2 +0.1
growth on oleic acid YNB Glucose +0.1 +0.2 +0.2 -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.2 +0.0 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 +0.3 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 +0.3 +0.2 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 +0.5 +0.1 +0.1 +0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.5 +0.1 +0.3 +0.3
remove
mRNA_2398
plot
remove
mRNA_2399
plot
remove
mRNA_2400
remove
mRNA_2401
plot
remove
mRNA_2402
plot