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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10766 and 10767 are separated by 229 nucleotides
10767 and 10768 are separated by 273 nucleotides
10768 and 10769 are separated by 390 nucleotides
10769 and 10770 are separated by 172 nucleotides
mRNA_2398: 10766 - SUPERFAMILY--SSF52047, at 24,008 to 25,280
10766
mRNA_2399: 10767 - Hypothetical Protein, at 25,510 to 29,581
10767
mRNA_2400: 10768 - Hypothetical Protein, at 29,855 to 31,003
10768
mRNA_2401: 10769 - HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300, at 31,394 to 33,493
10769
mRNA_2402: 10770 - K07870 RHOT1, ARHT1 Ras homolog gene family, member T1, at 33,666 to 36,845
10770
Group
Condition
mRNA
_2398
mRNA
_2399
mRNA
_2400
mRNA
_2401
mRNA
_2402
10766
10767
10768
10769
10770
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.6
+0.1
-0.3
-0.3
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.6
+0.2
+0.0
-0.2
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.2
+0.0
-0.3
-0.0
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.1
+0.1
+0.5
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
+0.3
+0.1
-0.4
+0.1
growth on ypd
YPD
-0.1
+0.1
+0.2
-0.1
-0.4
auxotrophy
Dropout Complete
-0.2
-0.1
+0.0
+0.1
+0.0
auxotrophy
YNB Glucose 75mM Arginine
-0.0
-0.1
-0.0
+0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
-0.2
+0.2
+0.2
growth on oleic acid
YNB Oleic Acid
-0.1
+0.1
+0.2
-0.0
-0.1
auxotrophy
YNB Glucose
-0.0
-0.1
+0.2
+0.1
+0.0
growth on ricinoleic acid
YNB Glucose
+0.1
+0.0
+0.1
-0.3
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.1
-0.2
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+0.1
+0.3
+0.0
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
+0.1
+0.4
-0.2
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.2
+0.2
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.2
+0.0
+0.3
+0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.2
+0.3
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
+0.3
+0.2
+0.2
+0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.5
+0.5
+0.1
+0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
+0.5
+0.1
+0.3
+0.3
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