Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10768 and 10769 are separated by 390 nucleotides
10769 and 10770 are separated by 172 nucleotides
10770 and 10771 are separated by 328 nucleotides
10771 and 10772 are separated by 344 nucleotides
mRNA_2400: 10768 - Hypothetical Protein, at 29,855 to 31,003
10768
mRNA_2401: 10769 - HMMPfam-von Willebrand factor type A domain-PF13519,ProSiteProfiles-VWFA domain profile.-PS50234,SMART-von Willebrand factor (vWF) type A domain-SM00327,SUPERFAMILY--SSF53300, at 31,394 to 33,493
10769
mRNA_2402: 10770 - K07870 RHOT1, ARHT1 Ras homolog gene family, member T1, at 33,666 to 36,845
10770
mRNA_2403: 10771 - HMMPfam-Protein of unknown function (DUF2462)-PF09495, at 37,174 to 37,596
10771
mRNA_2404: 10772 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 37,941 to 40,154
10772
Group
Condition
mRNA
_2400
mRNA
_2401
mRNA
_2402
mRNA
_2403
mRNA
_2404
10768
10769
10770
10771
10772
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.3
-0.4
-0.5
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.3
-0.0
-0.2
-0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
-0.2
-0.4
+0.1
+0.3
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.1
+0.2
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.1
+0.5
-0.1
-0.6
+0.2
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.2
+0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.2
-0.1
-0.3
+0.2
growth on ypd
YPD
+0.2
-0.1
-0.4
+0.1
+0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.3
+0.0
-0.1
-0.2
+0.0
growth on ricinoleic acid
YNB Glucose
+0.1
-0.3
+0.2
-0.0
+0.1
growth on oleic acid
YNB Glucose
+0.2
-0.1
-0.0
-0.2
+0.3
growth on oleic acid
YNB Oleic Acid
+0.2
-0.0
-0.1
-0.1
+0.2
auxotrophy
Dropout Complete
+0.0
+0.1
+0.0
-0.2
+0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.4
-0.2
+0.1
+0.1
+0.1
auxotrophy
YNB Glucose
+0.2
+0.1
+0.0
-0.2
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.1
+0.0
+0.0
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.1
-0.4
+0.1
+0.6
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.3
+0.3
+0.2
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.2
+0.0
+0.6
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.1
+0.3
+0.4
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.0
+0.3
+0.3
+0.2
+0.4
remove
mRNA_2400
plot
remove
mRNA_2401
plot
remove
mRNA_2402
remove
mRNA_2403
plot
remove
mRNA_2404
plot