Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10770 and 10771 are separated by 328 nucleotides10771 and 10772 are separated by 344 nucleotides10772 and 10773 are separated by 1026 nucleotides10773 and 10774 are separated by 709 nucleotides mRNA_2402: 10770 - K07870 RHOT1, ARHT1 Ras homolog gene family, member T1, at 33,666 to 36,845 10770 mRNA_2403: 10771 - HMMPfam-Protein of unknown function (DUF2462)-PF09495, at 37,174 to 37,596 10771 mRNA_2404: 10772 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 37,941 to 40,154 10772 mRNA_2405: 10773 - KOG1910 Uncharacterized conserved protein, at 41,181 to 51,337 10773 mRNA_2406: 10774 - KOG4111 Translocase of outer mitochondrial membrane complex, subunit TOM22, at 52,047 to 52,986 10774
Group Condition mRNA_2402 mRNA_2403 mRNA_2404 mRNA_2405 mRNA_2406
10770 10771 10772 10773 10774
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.5 -0.1 -0.4 -0.5
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.6 +0.2 -0.5 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 +0.1 -1.2 +0.0
growth on oleic acid YNB Oleic Acid -0.1 -0.1 +0.2 -0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 -0.1 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 -0.1 -0.0 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.1 -0.1 -0.1 -0.2
growth on ypd YPD -0.4 +0.1 +0.2 +0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.0 +0.3 +0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.1 +0.3 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +0.2 +0.2 +0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +0.2 +0.7 +0.0
growth on oleic acid YNB Glucose -0.0 -0.2 +0.3 +0.7 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.4 +0.1 +0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.1 +0.6 +0.2 +0.4 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.6 +0.0 +0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 +0.0 +0.7 +0.5
auxotrophy Dropout Complete +0.0 -0.2 +0.3 +0.6 +0.6
auxotrophy YNB Glucose +0.0 -0.2 +0.4 +0.9 +0.3
growth on ricinoleic acid YNB Glucose +0.2 -0.0 +0.1 +0.9 +0.8
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.2 +0.4 +1.1 +0.5
remove
mRNA_2402
plot
remove
mRNA_2403
plot
remove
mRNA_2404
remove
mRNA_2405
plot
remove
mRNA_2406
plot