Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10771 and 10772 are separated by 344 nucleotides10772 and 10773 are separated by 1026 nucleotides10773 and 10774 are separated by 709 nucleotides10774 and 10775 are separated by 99 nucleotides mRNA_2403: 10771 - HMMPfam-Protein of unknown function (DUF2462)-PF09495, at 37,174 to 37,596 10771 mRNA_2404: 10772 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 37,941 to 40,154 10772 mRNA_2405: 10773 - KOG1910 Uncharacterized conserved protein, at 41,181 to 51,337 10773 mRNA_2406: 10774 - KOG4111 Translocase of outer mitochondrial membrane complex, subunit TOM22, at 52,047 to 52,986 10774 mRNA_2407: 10775 - K10880 XRCC3 DNA-repair protein XRCC3, at 53,086 to 55,006 10775
Group Condition mRNA_2403 mRNA_2404 mRNA_2405 mRNA_2406 mRNA_2407
10771 10772 10773 10774 10775
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.2 -0.5 -0.3 -2.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.1 -0.4 -0.5 -1.2
facs on lipid accumulation Sorted High BODIPY Gate +0.6 +0.2 +0.4 -0.6 -2.7
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 -0.1 -0.2 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 +0.1 -1.2 +0.0 +0.2
growth on ypd YPD +0.1 +0.2 +0.1 -0.1 -1.0
growth on oleic acid YNB Oleic Acid -0.1 +0.2 -0.2 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 +0.1 +0.3 -0.3 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.2 +0.2 -0.3 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 +0.3 +0.2 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.1 -0.2 +0.6
growth on oleic acid YNB Glucose -0.2 +0.3 +0.7 -0.2 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 +0.0 +0.3 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.2 +0.7 +0.0 +0.0
growth on ricinoleic acid YNB Glucose -0.0 +0.1 +0.9 +0.8 -1.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.0 +0.3 +0.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.0 +0.7 +0.5 -0.2
auxotrophy Dropout Complete -0.2 +0.3 +0.6 +0.6 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.3 +0.1 +0.3 +0.6
auxotrophy YNB Glucose -0.2 +0.4 +0.9 +0.3 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.4 +1.1 +0.5 +0.1
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