Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10775 and 10776 are separated by 228 nucleotides
10776 and 10777 are separated by 84 nucleotides
10777 and 10778 are separated by 832 nucleotides
10778 and 10779 are separated by 903 nucleotides
mRNA_2407: 10775 - K10880 XRCC3 DNA-repair protein XRCC3, at 53,086 to 55,006
10775
mRNA_2408: 10776 - K07975 K07975 Rho family, other, at 55,235 to 56,824
10776
mRNA_2409: 10777 - Hypothetical Protein, at 56,909 to 58,334
10777
mRNA_2410: 10778 - Hypothetical Protein, at 59,167 to 60,066
10778
mRNA_2411: 10779 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 60,970 to 61,863
10779
Group
Condition
mRNA
_2407
mRNA
_2408
mRNA
_2409
mRNA
_2410
mRNA
_2411
10775
10776
10777
10778
10779
facs on lipid accumulation
Sorted High BODIPY Gate
-2.7
+0.1
-0.2
-0.1
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-2.4
-0.2
+0.4
+0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-1.9
-0.3
+0.3
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.2
-0.5
-0.1
-0.1
+0.1
growth on ricinoleic acid
YNB Glucose
-1.0
-0.6
+0.0
+0.3
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.2
-2.3
+0.0
+0.6
-0.0
auxotrophy
YNB Glucose
+0.1
-0.8
+0.4
-0.2
-0.2
auxotrophy
Dropout Complete
-0.2
-0.4
+0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.0
-0.4
-0.1
-0.0
-0.0
growth on ypd
YPD
-1.0
+0.3
+0.3
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.8
-0.4
+0.3
+0.3
+0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.1
-0.2
+0.1
-0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
-0.2
+0.4
-0.2
+0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.8
-0.4
+0.1
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.3
+0.1
+0.2
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.5
+0.3
+0.4
+0.2
growth on oleic acid
YNB Glucose
-0.3
-0.1
+0.5
+0.2
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.6
-0.2
-0.2
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
+0.2
+0.4
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
+0.2
+0.5
+0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.6
+0.0
+0.2
+0.2
+0.0
remove
mRNA_2407
plot
remove
mRNA_2408
plot
remove
mRNA_2409
remove
mRNA_2410
plot
remove
mRNA_2411
plot