Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10778 and 10779 are separated by 903 nucleotides10779 and 10780 are separated by 454 nucleotides10780 and 10781 are separated by 476 nucleotides10781 and 10782 are separated by 1259 nucleotides mRNA_2410: 10778 - Hypothetical Protein, at 59,167 to 60,066 10778 mRNA_2411: 10779 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 60,970 to 61,863 10779 mRNA_2412: 10780 - K04378 SRF serum response factor, at 62,318 to 64,458 10780 mRNA_2413: 10781 - K13108 SNIP1 smad nuclear-interacting protein 1, at 64,935 to 66,206 10781 mRNA_2414: 10782 - KOG1185 Thiamine pyrophosphate-requiring enzyme, at 67,466 to 70,057 10782
Group Condition mRNA_2410 mRNA_2411 mRNA_2412 mRNA_2413 mRNA_2414
10778 10779 10780 10781 10782
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.1 +0.3 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 +0.0 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.1 -0.4 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.1 -0.5 N.D. +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.1 -0.4 N.D. +0.1
growth on ypd YPD +0.2 -0.2 -0.1 N.D. -0.0
auxotrophy Dropout Complete -0.1 -0.1 -0.1 N.D. +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 +0.1 N.D. -0.3
growth on oleic acid YNB Oleic Acid +0.1 +0.1 -0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.2 -0.4 N.D. -0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 -0.4 -0.2 N.D. +0.5
auxotrophy YNB Glucose -0.2 -0.2 +0.6 N.D. +0.1
growth on oleic acid YNB Glucose +0.2 -0.0 +0.3 N.D. -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.0 +0.4 N.D. +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.3 +0.2 N.D. +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.2 +0.2 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.2 +0.6 N.D. +0.1
growth on ricinoleic acid YNB Glucose +0.3 -0.2 +0.7 N.D. -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.3 -0.1 +1.1 N.D. +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.6 -0.0 +0.4 N.D. +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.4 +0.2 +1.3 N.D. -0.0
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