Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10779 and 10780 are separated by 454 nucleotides10780 and 10781 are separated by 476 nucleotides10781 and 10782 are separated by 1259 nucleotides10782 and 10783 are separated by 41 nucleotides mRNA_2411: 10779 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 60,970 to 61,863 10779 mRNA_2412: 10780 - K04378 SRF serum response factor, at 62,318 to 64,458 10780 mRNA_2413: 10781 - K13108 SNIP1 smad nuclear-interacting protein 1, at 64,935 to 66,206 10781 mRNA_2414: 10782 - KOG1185 Thiamine pyrophosphate-requiring enzyme, at 67,466 to 70,057 10782 mRNA_2415: 10783 - Hypothetical Protein, at 70,099 to 71,162 10783
Group Condition mRNA_2411 mRNA_2412 mRNA_2413 mRNA_2414 mRNA_2415
10779 10780 10781 10782 10783
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.2 N.D. +0.5 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.5 N.D. +0.2 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.3 N.D. -0.4 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 N.D. -0.3 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.4 N.D. -0.2 -0.3
auxotrophy Dropout Complete -0.1 -0.1 N.D. +0.2 -0.3
growth on ypd YPD -0.2 -0.1 N.D. -0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 +0.2 N.D. -0.1 -0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.0 N.D. -0.0 +0.0
growth on oleic acid YNB Oleic Acid +0.1 -0.2 N.D. +0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 -0.4 N.D. +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.4 N.D. -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.2 N.D. +0.0 -0.3
auxotrophy YNB Glucose -0.2 +0.6 N.D. +0.1 -0.3
growth on ricinoleic acid YNB Glucose -0.2 +0.7 N.D. -0.0 -0.4
growth on oleic acid YNB Glucose -0.0 +0.3 N.D. -0.1 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.4 N.D. +0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.4 N.D. +0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine +0.2 +0.6 N.D. +0.1 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +1.1 N.D. +0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +1.3 N.D. -0.0 -0.2
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