Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10779 and 10780 are separated by 454 nucleotides
10780 and 10781 are separated by 476 nucleotides
10781 and 10782 are separated by 1259 nucleotides
10782 and 10783 are separated by 41 nucleotides
mRNA_2411: 10779 - HMMPfam-F-box-like-PF12937,SUPERFAMILY--SSF81383, at 60,970 to 61,863
10779
mRNA_2412: 10780 - K04378 SRF serum response factor, at 62,318 to 64,458
10780
mRNA_2413: 10781 - K13108 SNIP1 smad nuclear-interacting protein 1, at 64,935 to 66,206
10781
mRNA_2414: 10782 - KOG1185 Thiamine pyrophosphate-requiring enzyme, at 67,466 to 70,057
10782
mRNA_2415: 10783 - Hypothetical Protein, at 70,099 to 71,162
10783
Group
Condition
mRNA
_2411
mRNA
_2412
mRNA
_2413
mRNA
_2414
mRNA
_2415
10779
10780
10781
10782
10783
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.2
N.D.
+0.5
-0.8
ypd buoyancy
40 hrs High Buoyancy
-0.1
-0.5
N.D.
+0.2
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
N.D.
-0.4
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.1
N.D.
-0.3
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
-0.4
N.D.
-0.2
-0.3
auxotrophy
Dropout Complete
-0.1
-0.1
N.D.
+0.2
-0.3
growth on ypd
YPD
-0.2
-0.1
N.D.
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.2
+0.2
N.D.
-0.1
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
+0.0
N.D.
-0.0
+0.0
growth on oleic acid
YNB Oleic Acid
+0.1
-0.2
N.D.
+0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
-0.4
N.D.
+0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.4
N.D.
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.2
N.D.
+0.0
-0.3
auxotrophy
YNB Glucose
-0.2
+0.6
N.D.
+0.1
-0.3
growth on ricinoleic acid
YNB Glucose
-0.2
+0.7
N.D.
-0.0
-0.4
growth on oleic acid
YNB Glucose
-0.0
+0.3
N.D.
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.0
+0.4
N.D.
+0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.4
N.D.
+0.2
+0.0
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.6
N.D.
+0.1
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
+1.1
N.D.
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
+1.3
N.D.
-0.0
-0.2
remove
mRNA_2411
plot
remove
mRNA_2412
plot
remove
mRNA_2413
remove
mRNA_2414
plot
remove
mRNA_2415
plot