Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10781 and 10782 are separated by 1259 nucleotides10782 and 10783 are separated by 41 nucleotides10783 and 10784 are separated by 898 nucleotides10784 and 10785 are separated by 157 nucleotides mRNA_2413: 10781 - K13108 SNIP1 smad nuclear-interacting protein 1, at 64,935 to 66,206 10781 mRNA_2414: 10782 - KOG1185 Thiamine pyrophosphate-requiring enzyme, at 67,466 to 70,057 10782 mRNA_2415: 10783 - Hypothetical Protein, at 70,099 to 71,162 10783 mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72,061 to 74,634 10784 mRNA_2417: 10785 - SUPERFAMILY--SSF52047, at 74,792 to 76,110 10785
Group Condition mRNA_2413 mRNA_2414 mRNA_2415 mRNA_2416 mRNA_2417
10781 10782 10783 10784 10785
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.4 -0.4 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 -0.6 +0.3 -1.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.3 -0.4 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.2 -0.3 +0.4 -1.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 -0.3 +0.3 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.0 -0.2 +0.4 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 -0.1 -0.4 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.5 -0.8 +0.3 -0.5
growth on ypd YPD N.D. -0.0 +0.0 +0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy N.D. +0.2 -0.3 +0.2 -0.5
growth on oleic acid YNB Glucose N.D. -0.1 +0.1 -0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 +0.0 -0.3 -0.1
auxotrophy YNB Glucose N.D. +0.1 -0.3 +0.1 -0.2
auxotrophy Dropout Complete N.D. +0.2 -0.3 -0.1 -0.0
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.4 +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.1 +0.3 -0.2 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.0 -0.0 +0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 -0.1 +0.0 -0.1
growth on oleic acid YNB Oleic Acid N.D. +0.1 -0.2 +0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid N.D. +0.2 +0.0 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.0 +0.2 -0.1
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