Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10786 and 10787 are separated by 113 nucleotides10787 and 10788 are separated by 278 nucleotides10788 and 10789 are separated by 126 nucleotides10789 and 10790 are separated by 140 nucleotides mRNA_2418: 10786 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 77,070 to 79,296 10786 mRNA_2419: 10787 - HMMPfam-Domain of unknown function (DUF4385)-PF14328, at 79,410 to 80,151 10787 mRNA_2420: 10788 - KOG2618 Uncharacterized conserved protein, at 80,430 to 82,352 10788 mRNA_2421: 10789 - K11800 WDR22, BCRP2 WD repeat-containing protein 22, at 82,479 to 84,495 10789 mRNA_2422: 10790 - KOG2342 Uncharacterized conserved protein, at 84,636 to 85,865 10790
Group Condition mRNA_2418 mRNA_2419 mRNA_2420 mRNA_2421 mRNA_2422
10786 10787 10788 10789 10790
auxotrophy Dropout Complete -0.1 -0.2 -0.1 -0.6 -0.3
growth on ypd YPD -0.0 +0.3 -0.4 -0.6 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.4 -0.3 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.4 -0.1 -0.2 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.0 +0.2 -0.1 -0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.2 -0.2 +0.4 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.3 -0.1 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 +0.3 -0.1 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.2 +0.1 -0.3 -0.0
growth on ricinoleic acid YNB Glucose -0.2 +0.2 -0.3 +0.1 -0.0
auxotrophy YNB Glucose -0.0 +0.3 -0.0 -0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.2 -0.1 -0.0 +0.1
growth on oleic acid YNB Glucose +0.1 +0.1 +0.1 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.4 +0.2 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.3 +0.3 -0.1 +0.2
growth on oleic acid YNB Oleic Acid +0.1 +0.0 +0.1 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 -0.1 +0.2 +0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.1 +0.1 -0.0 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 +0.2 +0.3 -0.1 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.0 +0.1 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 +0.2 +0.5 -0.9 +0.6
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