Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10786 and 10787 are separated by 113 nucleotides
10787 and 10788 are separated by 278 nucleotides
10788 and 10789 are separated by 126 nucleotides
10789 and 10790 are separated by 140 nucleotides
mRNA_2418: 10786 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 77,070 to 79,296
10786
mRNA_2419: 10787 - HMMPfam-Domain of unknown function (DUF4385)-PF14328, at 79,410 to 80,151
10787
mRNA_2420: 10788 - KOG2618 Uncharacterized conserved protein, at 80,430 to 82,352
10788
mRNA_2421: 10789 - K11800 WDR22, BCRP2 WD repeat-containing protein 22, at 82,479 to 84,495
10789
mRNA_2422: 10790 - KOG2342 Uncharacterized conserved protein, at 84,636 to 85,865
10790
Group
Condition
mRNA
_2418
mRNA
_2419
mRNA
_2420
mRNA
_2421
mRNA
_2422
10786
10787
10788
10789
10790
auxotrophy
Dropout Complete
-0.1
-0.2
-0.1
-0.6
-0.3
growth on ypd
YPD
-0.0
+0.3
-0.4
-0.6
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
+0.4
-0.3
-0.2
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.4
-0.1
-0.2
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.2
-0.1
-0.3
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.4
+0.2
-0.2
+0.4
-0.3
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.3
-0.1
-0.2
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.3
-0.1
+0.1
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.2
+0.1
-0.3
-0.0
growth on ricinoleic acid
YNB Glucose
-0.2
+0.2
-0.3
+0.1
-0.0
auxotrophy
YNB Glucose
-0.0
+0.3
-0.0
-0.3
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
+0.2
-0.1
-0.0
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.1
+0.1
-0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.4
+0.2
+0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.3
+0.3
-0.1
+0.2
growth on oleic acid
YNB Oleic Acid
+0.1
+0.0
+0.1
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.1
+0.2
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.1
+0.1
-0.0
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.3
+0.2
+0.3
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
+0.0
+0.1
+0.2
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.2
+0.5
-0.9
+0.6
remove
mRNA_2418
plot
remove
mRNA_2419
plot
remove
mRNA_2420
remove
mRNA_2421
plot
remove
mRNA_2422
plot