Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10788 and 10789 are separated by 126 nucleotides10789 and 10790 are separated by 140 nucleotides10790 and 10791 are separated by 222 nucleotides10791 and 10792 are separated by 581 nucleotides mRNA_2420: 10788 - KOG2618 Uncharacterized conserved protein, at 80,430 to 82,352 10788 mRNA_2421: 10789 - K11800 WDR22, BCRP2 WD repeat-containing protein 22, at 82,479 to 84,495 10789 mRNA_2422: 10790 - KOG2342 Uncharacterized conserved protein, at 84,636 to 85,865 10790 mRNA_2423: 10791 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 86,088 to 89,055 10791 mRNA_2424: 10792 - KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation), at 89,637 to 90,963 10792
Group Condition mRNA_2420 mRNA_2421 mRNA_2422 mRNA_2423 mRNA_2424
10788 10789 10790 10791 10792
auxotrophy Dropout Complete -0.1 -0.6 -0.3 -0.1 -0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 +0.2 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.2 -0.2 -0.2 +0.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 -0.4 +0.1 +0.0
auxotrophy YNB Glucose -0.0 -0.3 -0.0 +0.1 -0.1
growth on ricinoleic acid YNB Glucose -0.3 +0.1 -0.0 -0.4 +0.4
growth on oleic acid YNB Glucose +0.1 -0.1 -0.2 -0.1 +0.2
growth on ypd YPD -0.4 -0.6 -0.0 +0.3 +0.7
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.9 +0.6 +0.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 -0.0 -0.0 +0.3
growth on oleic acid YNB Oleic Acid +0.1 +0.1 -0.0 +0.0 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.0 +0.1 -0.3 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 -0.0 +0.3 +0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.4 -0.3 +0.0 +0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.3 -0.1 +0.0 -0.3 +0.7
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 -0.2 +0.3 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.0 +0.0 +0.2 +0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 -0.2 +0.2 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.2 -0.1 +0.1 +0.7
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 -0.1 +0.0 +0.8
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 +0.2 +0.3 +0.5
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