Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10789 and 10790 are separated by 140 nucleotides10790 and 10791 are separated by 222 nucleotides10791 and 10792 are separated by 581 nucleotides10792 and 10793 are separated by 119 nucleotides mRNA_2421: 10789 - K11800 WDR22, BCRP2 WD repeat-containing protein 22, at 82,479 to 84,495 10789 mRNA_2422: 10790 - KOG2342 Uncharacterized conserved protein, at 84,636 to 85,865 10790 mRNA_2423: 10791 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 86,088 to 89,055 10791 mRNA_2424: 10792 - KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation), at 89,637 to 90,963 10792 mRNA_2425: 10793 - K02732 PSMB1 20S proteasome subunit beta 6, at 91,083 to 92,591 10793
Group Condition mRNA_2421 mRNA_2422 mRNA_2423 mRNA_2424 mRNA_2425
10789 10790 10791 10792 10793
auxotrophy Dropout Complete -0.6 -0.3 -0.1 -0.4 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 +0.2 -0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.4 +0.1 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 -0.2 +0.0 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 +0.6 +0.2 -0.4 N.D.
auxotrophy YNB Glucose -0.3 -0.0 +0.1 -0.1 N.D.
growth on oleic acid YNB Glucose -0.1 -0.2 -0.1 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0 -0.0 +0.3 N.D.
growth on oleic acid YNB Oleic Acid +0.1 -0.0 +0.0 -0.0 N.D.
growth on ricinoleic acid YNB Glucose +0.1 -0.0 -0.4 +0.4 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 +0.1 -0.3 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 +0.0 -0.3 +0.7 N.D.
growth on ypd YPD -0.6 -0.0 +0.3 +0.7 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.0 +0.3 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 +0.0 +0.2 +0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 +0.3 +0.6 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.3 +0.0 +0.7 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.2 +0.2 +0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.1 +0.0 +0.8 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 +0.3 +0.5 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.1 +0.1 +0.7 N.D.
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