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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10794 and 10795 are separated by 549 nucleotides
10795 and 10796 are separated by 64 nucleotides
10796 and 10797 are separated by 231 nucleotides
10797 and 10798 are separated by 675 nucleotides
mRNA_2426: 10794 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 92,965 to 95,698
10794
mRNA_2427: 10795 - Hypothetical Protein, at 96,248 to 96,907
10795
mRNA_2428: 10796 - KOG0583 Serine/threonine protein kinase, at 96,972 to 102,025
10796
mRNA_2429: 10797 - K03347 CUL1, CDC53 cullin 1, at 102,257 to 105,935
10797
mRNA_2430: 10798 - K09467 MIG zinc-finger protein CreA/MIG, at 106,611 to 109,400
10798
Group
Condition
mRNA
_2426
mRNA
_2427
mRNA
_2428
mRNA
_2429
mRNA
_2430
10794
10795
10796
10797
10798
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.0
+0.1
N.D.
-3.9
ypd buoyancy
40 hrs Median Buoyancy
-0.2
+0.0
+0.1
N.D.
-2.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
-0.1
+0.3
N.D.
-1.8
growth on ricinoleic acid
YNB Glucose
-0.1
-0.2
-0.3
N.D.
-0.5
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
-0.0
+0.2
N.D.
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.0
+0.2
-0.0
N.D.
-0.3
auxotrophy
Dropout Complete
+0.2
-0.5
-0.0
N.D.
+0.2
auxotrophy
YNB Glucose
+0.1
-0.3
+0.2
N.D.
+0.1
growth on ypd
YPD
-0.0
-0.0
+0.1
N.D.
-0.0
growth on oleic acid
YNB Glucose
-0.0
+0.0
-0.1
N.D.
+0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
-0.3
+0.2
N.D.
+0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.0
+0.2
N.D.
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.1
-0.5
N.D.
+0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
+0.1
-0.1
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.1
-0.2
N.D.
+0.4
ypd buoyancy
40 hrs High Buoyancy
+0.1
+0.0
-0.2
N.D.
+0.5
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
+0.0
-0.1
N.D.
+0.5
auxotrophy
YNB Glucose 75mM Methionine
+0.2
-0.1
+0.4
N.D.
+0.3
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.3
N.D.
+1.4
facs on lipid accumulation
Sorted High BODIPY Gate
+0.4
+0.4
+0.3
N.D.
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.2
+0.3
N.D.
+1.1
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