Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10795 and 10796 are separated by 64 nucleotides10796 and 10797 are separated by 231 nucleotides10797 and 10798 are separated by 675 nucleotides10798 and 10799 are separated by 518 nucleotides mRNA_2427: 10795 - Hypothetical Protein, at 96,248 to 96,907 10795 mRNA_2428: 10796 - KOG0583 Serine/threonine protein kinase, at 96,972 to 102,025 10796 mRNA_2429: 10797 - K03347 CUL1, CDC53 cullin 1, at 102,257 to 105,935 10797 mRNA_2430: 10798 - K09467 MIG zinc-finger protein CreA/MIG, at 106,611 to 109,400 10798 mRNA_2431: 10799 - Hypothetical Protein, at 109,919 to 110,380 10799
Group Condition mRNA_2427 mRNA_2428 mRNA_2429 mRNA_2430 mRNA_2431
10795 10796 10797 10798 10799
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 N.D. -3.9 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 N.D. -2.3 +0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.3 N.D. -1.8 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.3 N.D. -0.5 +0.1
growth on ypd YPD -0.0 +0.1 N.D. -0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 +0.2 N.D. -0.0 -0.2
growth on oleic acid YNB Glucose +0.0 -0.1 N.D. +0.2 -0.2
auxotrophy Dropout Complete -0.5 -0.0 N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 -0.0 N.D. -0.3 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.1 N.D. +0.3 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.0 -0.2 N.D. +0.5 -0.1
auxotrophy YNB Glucose -0.3 +0.2 N.D. +0.1 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2 N.D. +0.4 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 +0.2 N.D. +0.1 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.3 N.D. -0.3 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.1 N.D. +0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.2 N.D. +0.3 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.5 N.D. +0.8 +0.3
growth on oleic acid YNB Oleic Acid -0.1 -0.3 N.D. +1.4 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.4 N.D. +0.3 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.3 N.D. +1.1 -0.1
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