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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10796 and 10797 are separated by 231 nucleotides
10797 and 10798 are separated by 675 nucleotides
10798 and 10799 are separated by 518 nucleotides
10799 and 10800 are separated by 967 nucleotides
mRNA_2428: 10796 - KOG0583 Serine/threonine protein kinase, at 96,972 to 102,025
10796
mRNA_2429: 10797 - K03347 CUL1, CDC53 cullin 1, at 102,257 to 105,935
10797
mRNA_2430: 10798 - K09467 MIG zinc-finger protein CreA/MIG, at 106,611 to 109,400
10798
mRNA_2431: 10799 - Hypothetical Protein, at 109,919 to 110,380
10799
mRNA_2432: 10800 - K20028 ZDHHC2_15_20 palmitoyltransferase ZDHHC2/15/20, at 111,348 to 112,998
10800
Group
Condition
mRNA
_2428
mRNA
_2429
mRNA
_2430
mRNA
_2431
mRNA
_2432
10796
10797
10798
10799
10800
ypd buoyancy
40 hrs Low Buoyancy
+0.1
N.D.
-3.9
+0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
-2.3
+0.0
+0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.3
N.D.
-1.8
-0.1
+0.3
growth on ricinoleic acid
YNB Glucose
-0.3
N.D.
-0.5
+0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
N.D.
+0.8
+0.3
-1.4
auxotrophy
Dropout Complete
-0.0
N.D.
+0.2
+0.3
-0.9
growth on ypd
YPD
+0.1
N.D.
-0.0
-0.4
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
N.D.
-0.0
-0.2
-0.1
growth on oleic acid
YNB Glucose
-0.1
N.D.
+0.2
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Arginine
+0.2
N.D.
+0.3
+0.3
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
N.D.
-0.3
+0.0
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.3
-0.3
+0.2
auxotrophy
YNB Glucose
+0.2
N.D.
+0.1
+0.4
-0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
N.D.
+0.1
+0.1
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
N.D.
+0.4
+0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.2
N.D.
+0.5
-0.1
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
-0.3
+0.1
+0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
+0.5
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.4
N.D.
+0.3
+0.5
-0.6
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
+1.4
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
N.D.
+1.1
-0.1
+0.4
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