Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10801 and 10802 are separated by 723 nucleotides10802 and 10803 are separated by 967 nucleotides10803 and 10804 are separated by 276 nucleotides10804 and 10805 are separated by 2354 nucleotides mRNA_2433: 10801 - K10866 RAD50 DNA repair protein RAD50, at 113,156 to 118,783 10801 mRNA_2434: 10802 - HMMPfam-ATP synthase subunit H-PF05493, at 119,507 to 119,841 10802 mRNA_2435: 10803 - Hypothetical Protein, at 120,809 to 121,330 10803 mRNA_2436: 10804 - KOG0254 Predicted transporter (major facilitator superfamily), at 121,607 to 125,074 10804 mRNA_2437: 10805 - Hypothetical Protein, at 127,429 to 129,055 10805
Group Condition mRNA_2433 mRNA_2434 mRNA_2435 mRNA_2436 mRNA_2437
10801 10802 10803 10804 10805
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 N.D. -0.2 -0.2 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -1.3 N.D. +0.3 -0.2 +0.1
growth on ypd YPD -1.0 N.D. +0.1 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.5 N.D. +0.1 -0.3 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 N.D. -0.0 -0.3 -0.0
growth on ricinoleic acid YNB Glucose +0.0 N.D. -0.2 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 N.D. -0.2 -0.3 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.0 N.D. +0.0 +0.0 -0.2
auxotrophy YNB Glucose 75mM Arginine -1.0 N.D. -0.3 +0.3 +0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 N.D. +0.2 -0.2 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 N.D. -0.0 +0.3 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.3 N.D. -0.1 -0.1 +0.2
auxotrophy Dropout Complete -0.4 N.D. -0.2 +0.1 +0.9
auxotrophy YNB Glucose 75mM Methionine -0.5 N.D. -0.2 +0.4 +0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 N.D. -0.1 -0.1 +0.8
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.6 N.D. -0.0 -0.1 -0.0
growth on oleic acid YNB Glucose +0.0 N.D. -0.1 -0.1 +0.7
auxotrophy YNB Glucose -0.3 N.D. -0.2 +0.3 +0.8
growth on oleic acid YNB Oleic Acid +0.4 N.D. -0.1 -0.1 +1.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 N.D. +0.3 -0.2 +1.5
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 N.D. -0.5 +0.0 +1.3
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