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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10803 and 10804 are separated by 276 nucleotides
10804 and 10805 are separated by 2354 nucleotides
10805 and 10806 are separated by 2889 nucleotides
10806 and 10807 are separated by 213 nucleotides
mRNA_2435: 10803 - Hypothetical Protein, at 120,809 to 121,330
10803
mRNA_2436: 10804 - KOG0254 Predicted transporter (major facilitator superfamily), at 121,607 to 125,074
10804
mRNA_2437: 10805 - Hypothetical Protein, at 127,429 to 129,055
10805
mRNA_2438: 10806 - HMMPfam-Predicted coiled-coil protein (DUF2205)-PF10224, at 131,945 to 132,522
10806
mRNA_2439: 10807 - BLAST ribosome biogenesis protein [Moniliophthora rorer..., at 132,736 to 133,822
10807
Group
Condition
mRNA
_2435
mRNA
_2436
mRNA
_2437
mRNA
_2438
mRNA
_2439
10803
10804
10805
10806
10807
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.3
-0.4
-2.0
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.3
-2.0
N.D.
facs on lipid accumulation
Sorted No BODIPY Gate
+0.3
-0.2
+0.1
-1.2
N.D.
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.3
-0.1
-1.0
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.0
-0.2
-0.4
N.D.
growth on ypd
YPD
+0.1
-0.1
+0.3
-0.6
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
-0.0
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.3
-0.8
+1.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
+0.2
+0.5
N.D.
growth on ricinoleic acid
YNB Glucose
-0.2
-0.0
-0.1
+1.0
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.5
+0.0
+1.3
-0.0
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.2
+0.4
+0.7
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.3
-0.0
+1.4
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
+0.3
-0.2
+1.5
-0.6
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.3
+0.8
+0.3
N.D.
auxotrophy
YNB Glucose
-0.2
+0.3
+0.8
+0.2
N.D.
auxotrophy
Dropout Complete
-0.2
+0.1
+0.9
+0.5
N.D.
growth on oleic acid
YNB Glucose
-0.1
-0.1
+0.7
+0.8
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
+0.8
+1.1
N.D.
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
+1.1
+1.0
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.2
+0.3
+2.4
N.D.
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