Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10804 and 10805 are separated by 2354 nucleotides10805 and 10806 are separated by 2889 nucleotides10806 and 10807 are separated by 213 nucleotides10807 and 10808 are separated by 420 nucleotides mRNA_2436: 10804 - KOG0254 Predicted transporter (major facilitator superfamily), at 121,607 to 125,074 10804 mRNA_2437: 10805 - Hypothetical Protein, at 127,429 to 129,055 10805 mRNA_2438: 10806 - HMMPfam-Predicted coiled-coil protein (DUF2205)-PF10224, at 131,945 to 132,522 10806 mRNA_2439: 10807 - BLAST ribosome biogenesis protein [Moniliophthora rorer..., at 132,736 to 133,822 10807 mRNA_2440: 10808 - Hypothetical Protein, at 134,243 to 137,592 10808
Group Condition mRNA_2436 mRNA_2437 mRNA_2438 mRNA_2439 mRNA_2440
10804 10805 10806 10807 10808
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.3 -2.0 N.D. -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.4 -2.0 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.1 -1.2 N.D. -0.4
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.1 -1.0 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 -0.2 -0.4 N.D. -0.2
growth on ypd YPD -0.1 +0.3 -0.6 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.0 +0.0 N.D. -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.8 +1.1 N.D. +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.2 +0.5 N.D. -0.4
growth on ricinoleic acid YNB Glucose -0.0 -0.1 +1.0 N.D. -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +1.5 -0.6 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0 +1.4 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine +0.4 +0.7 +0.0 N.D. -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 +1.3 -0.0 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.8 +0.3 N.D. -0.2
growth on oleic acid YNB Glucose -0.1 +0.7 +0.8 N.D. -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.8 +1.1 N.D. -0.4
auxotrophy Dropout Complete +0.1 +0.9 +0.5 N.D. -0.1
auxotrophy YNB Glucose +0.3 +0.8 +0.2 N.D. +0.0
growth on oleic acid YNB Oleic Acid -0.1 +1.1 +1.0 N.D. -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.3 +2.4 N.D. -0.0
remove
mRNA_2436
plot
remove
mRNA_2437
plot
remove
mRNA_2438
remove
mRNA_2439
plot
remove
mRNA_2440
plot