Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10805 and 10806 are separated by 2889 nucleotides10806 and 10807 are separated by 213 nucleotides10807 and 10808 are separated by 420 nucleotides10808 and 10809 are separated by 418 nucleotides mRNA_2437: 10805 - Hypothetical Protein, at 127,429 to 129,055 10805 mRNA_2438: 10806 - HMMPfam-Predicted coiled-coil protein (DUF2205)-PF10224, at 131,945 to 132,522 10806 mRNA_2439: 10807 - BLAST ribosome biogenesis protein [Moniliophthora rorer..., at 132,736 to 133,822 10807 mRNA_2440: 10808 - Hypothetical Protein, at 134,243 to 137,592 10808 mRNA_2441: 10809 - KOG1284 Bifunctional GTP cyclohydrolase II/3,4-dihydroxy-2butanone-4-phosphate synthase, at 138,011 to 140,441 10809
Group Condition mRNA_2437 mRNA_2438 mRNA_2439 mRNA_2440 mRNA_2441
10805 10806 10807 10808 10809
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -2.0 N.D. -0.4 -2.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -2.0 N.D. +0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -1.2 N.D. -0.4 -0.8
ypd buoyancy 40 hrs High Buoyancy -0.1 -1.0 N.D. -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.4 N.D. -0.2 +0.1
growth on ypd YPD +0.3 -0.6 N.D. -0.1 +0.0
facs on lipid accumulation Sorted High BODIPY Gate +1.5 -0.6 N.D. +0.1 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 +0.0 N.D. -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 +1.1 N.D. +0.0 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.5 N.D. -0.4 +0.2
auxotrophy YNB Glucose +0.8 +0.2 N.D. +0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.8 +0.3 N.D. -0.2 +0.0
growth on ricinoleic acid YNB Glucose -0.1 +1.0 N.D. -0.3 +0.3
auxotrophy YNB Glucose 75mM Methionine +0.7 +0.0 N.D. -0.1 +0.5
growth on ricinoleic acid YNB Ricinoleic Acid +1.3 -0.0 N.D. -0.2 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +1.4 N.D. -0.0 +0.0
auxotrophy Dropout Complete +0.9 +0.5 N.D. -0.1 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.8 +1.1 N.D. -0.4 +0.4
growth on oleic acid YNB Glucose +0.7 +0.8 N.D. -0.2 +0.6
growth on oleic acid YNB Oleic Acid +1.1 +1.0 N.D. -0.4 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 +2.4 N.D. -0.0 +1.0
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